Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.5□□□□□ -0.09
COL8A2P25067 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.5□□□□□ -0.09
COL8A2P25067 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
COL8A2P25067 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.5□□□□□ -0.09
COL8A2P25067 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.5□□□□□ -0.09
COL8A2P25067 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.5□□□□□ -0.09
COL8A2P25067 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 UPF3AP3-201ENST00000420996 769 ntBASIC14.5□□□□□ -0.09
COL8A2P25067 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.5□□□□□ -0.09
COL8A2P25067 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.5□□□□□ -0.09
COL8A2P25067 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.5□□□□□ -0.09
COL8A2P25067 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.5□□□□□ -0.09
COL8A2P25067 OR7E47P-204ENST00000575924 449 ntBASIC14.5□□□□□ -0.09
COL8A2P25067 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.5□□□□□ -0.09
COL8A2P25067 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.5□□□□□ -0.09
COL8A2P25067 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.5□□□□□ -0.09
COL8A2P25067 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.5□□□□□ -0.09
COL8A2P25067 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
COL8A2P25067 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL8A2P25067 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.49□□□□□ -0.09
COL8A2P25067 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.49□□□□□ -0.09
COL8A2P25067 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
COL8A2P25067 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.49□□□□□ -0.09
COL8A2P25067 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
COL8A2P25067 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.49□□□□□ -0.09
COL8A2P25067 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
COL8A2P25067 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
COL8A2P25067 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
COL8A2P25067 RPSAP43-201ENST00000402237 625 ntBASIC14.49□□□□□ -0.09
COL8A2P25067 AC004832.2-201ENST00000426397 482 ntBASIC14.49□□□□□ -0.09
COL8A2P25067 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.49□□□□□ -0.09
COL8A2P25067 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.49□□□□□ -0.09
COL8A2P25067 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
COL8A2P25067 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.49□□□□□ -0.09
COL8A2P25067 AC002347.1-201ENST00000569543 541 ntBASIC14.49□□□□□ -0.09
COL8A2P25067 MIR3687-2-201ENST00000577708 61 ntBASIC14.49□□□□□ -0.09
COL8A2P25067 MIR3687-1-201ENST00000614492 61 ntBASIC14.49□□□□□ -0.09
COL8A2P25067 AC010654.1-201ENST00000615722 808 ntBASIC14.49□□□□□ -0.09
COL8A2P25067 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.49□□□□□ -0.09
COL8A2P25067 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
COL8A2P25067 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.49□□□□□ -0.09
COL8A2P25067 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.49□□□□□ -0.09
COL8A2P25067 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.49□□□□□ -0.09
COL8A2P25067 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL8A2P25067 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
COL8A2P25067 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.48□□□□□ -0.09
COL8A2P25067 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.48□□□□□ -0.09
COL8A2P25067 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
COL8A2P25067 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 IGLL3P-201ENST00000412472 434 ntBASIC14.48□□□□□ -0.09
COL8A2P25067 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.48□□□□□ -0.09
COL8A2P25067 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.48□□□□□ -0.09
COL8A2P25067 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.48□□□□□ -0.09
COL8A2P25067 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.48□□□□□ -0.09
COL8A2P25067 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL8A2P25067 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.48□□□□□ -0.09
COL8A2P25067 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms