Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.71□□□□□ -0.05
TNFSF4P23510 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.06
TNFSF4P23510 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
TNFSF4P23510 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TNFSF4P23510 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TNFSF4P23510 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.71□□□□□ -0.06
TNFSF4P23510 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
TNFSF4P23510 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 AL139384.1-201ENST00000612143 3047 ntBASIC14.7□□□□□ -0.06
TNFSF4P23510 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TNFSF4P23510 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.7□□□□□ -0.06
TNFSF4P23510 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TNFSF4P23510 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.7□□□□□ -0.06
TNFSF4P23510 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.7□□□□□ -0.06
TNFSF4P23510 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.7□□□□□ -0.06
TNFSF4P23510 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.7□□□□□ -0.06
TNFSF4P23510 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.7□□□□□ -0.06
TNFSF4P23510 AC009078.2-202ENST00000463353 338 ntBASIC14.7□□□□□ -0.06
TNFSF4P23510 AC079776.4-201ENST00000511039 504 ntBASIC14.7□□□□□ -0.06
TNFSF4P23510 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.7□□□□□ -0.06
TNFSF4P23510 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.7□□□□□ -0.06
TNFSF4P23510 AC105339.3-201ENST00000560043 636 ntBASIC14.7□□□□□ -0.06
TNFSF4P23510 SLC25A6P4-201ENST00000586535 553 ntBASIC14.7□□□□□ -0.06
TNFSF4P23510 AL139424.1-201ENST00000607572 797 ntBASIC14.7□□□□□ -0.06
TNFSF4P23510 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
TNFSF4P23510 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.7□□□□□ -0.06
TNFSF4P23510 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.7□□□□□ -0.06
TNFSF4P23510 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.7□□□□□ -0.06
TNFSF4P23510 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
TNFSF4P23510 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
TNFSF4P23510 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
TNFSF4P23510 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.7□□□□□ -0.06
TNFSF4P23510 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TNFSF4P23510 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.69□□□□□ -0.06
TNFSF4P23510 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.69□□□□□ -0.06
TNFSF4P23510 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFSF4P23510 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.69□□□□□ -0.06
TNFSF4P23510 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.69□□□□□ -0.06
TNFSF4P23510 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.69□□□□□ -0.06
TNFSF4P23510 AC005593.1-201ENST00000624894 515 ntBASIC14.69□□□□□ -0.06
TNFSF4P23510 FAM215A-202ENST00000632077 792 ntBASIC14.69□□□□□ -0.06
TNFSF4P23510 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.69□□□□□ -0.06
TNFSF4P23510 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFSF4P23510 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TNFSF4P23510 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFSF4P23510 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TNFSF4P23510 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.69□□□□□ -0.06
TNFSF4P23510 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TNFSF4P23510 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TNFSF4P23510 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFSF4P23510 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TNFSF4P23510 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFSF4P23510 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TNFSF4P23510 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TNFSF4P23510 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TNFSF4P23510 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TNFSF4P23510 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFSF4P23510 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFSF4P23510 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFSF4P23510 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFSF4P23510 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms