Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.56■□□□□ 0.24
CAPN3P20807 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.56■□□□□ 0.24
CAPN3P20807 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
CAPN3P20807 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 AC092119.3-201ENST00000612618 583 ntBASIC16.56■□□□□ 0.24
CAPN3P20807 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.56■□□□□ 0.24
CAPN3P20807 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.56■□□□□ 0.24
CAPN3P20807 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN3P20807 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CAPN3P20807 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.56■□□□□ 0.24
CAPN3P20807 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CAPN3P20807 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 AC026691.1-201ENST00000602502 2017 ntBASIC16.55■□□□□ 0.24
CAPN3P20807 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 AL662844.4-201ENST00000606367 2838 ntBASIC16.55■□□□□ 0.24
CAPN3P20807 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CAPN3P20807 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.55■□□□□ 0.24
CAPN3P20807 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CAPN3P20807 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.55■□□□□ 0.24
CAPN3P20807 AL390719.2-201ENST00000606993 987 ntBASIC16.55■□□□□ 0.24
CAPN3P20807 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.55■□□□□ 0.24
CAPN3P20807 HYMAI.1-201ENST00000620949 238 ntBASIC16.55■□□□□ 0.24
CAPN3P20807 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CAPN3P20807 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CAPN3P20807 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 EGFEM1P-202ENST00000431685 1563 ntBASIC16.55■□□□□ 0.24
CAPN3P20807 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CAPN3P20807 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CAPN3P20807 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CAPN3P20807 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.54■□□□□ 0.24
CAPN3P20807 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CAPN3P20807 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CAPN3P20807 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN3P20807 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN3P20807 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CAPN3P20807 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.54■□□□□ 0.24
CAPN3P20807 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CAPN3P20807 AC007967.3-201ENST00000434308 558 ntBASIC16.54■□□□□ 0.24
CAPN3P20807 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 IGHV3-52-201ENST00000519770 353 ntBASIC16.54■□□□□ 0.24
CAPN3P20807 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.54■□□□□ 0.24
CAPN3P20807 AC005332.3-201ENST00000589904 676 ntBASIC16.54■□□□□ 0.24
CAPN3P20807 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CAPN3P20807 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN3P20807 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CAPN3P20807 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN3P20807 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN3P20807 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms