Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.66■□□□□ 0.42
ERCC2P18074 AF186996.4-201ENST00000467186 377 ntBASIC17.66■□□□□ 0.42
ERCC2P18074 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC2P18074 AP002469.2-201ENST00000531724 424 ntBASIC17.66■□□□□ 0.42
ERCC2P18074 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.66■□□□□ 0.42
ERCC2P18074 AL160237.2-201ENST00000556165 472 ntBASIC17.66■□□□□ 0.42
ERCC2P18074 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.66■□□□□ 0.42
ERCC2P18074 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC2P18074 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC2P18074 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC2P18074 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
ERCC2P18074 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 AD000864.1-201ENST00000624076 2295 ntBASIC17.66■□□□□ 0.42
ERCC2P18074 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ERCC2P18074 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
ERCC2P18074 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ERCC2P18074 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ERCC2P18074 AC006504.4-201ENST00000592118 1568 ntBASIC17.66■□□□□ 0.42
ERCC2P18074 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ERCC2P18074 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC2P18074 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC2P18074 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ERCC2P18074 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC2P18074 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ERCC2P18074 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC2P18074 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.65■□□□□ 0.42
ERCC2P18074 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.65■□□□□ 0.42
ERCC2P18074 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.65■□□□□ 0.42
ERCC2P18074 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.65■□□□□ 0.42
ERCC2P18074 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
ERCC2P18074 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC2P18074 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
ERCC2P18074 AC006557.2-201ENST00000592985 1240 ntBASIC17.65■□□□□ 0.42
ERCC2P18074 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.65■□□□□ 0.42
ERCC2P18074 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC2P18074 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ERCC2P18074 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC2P18074 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC2P18074 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ERCC2P18074 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ERCC2P18074 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC2P18074 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ERCC2P18074 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ERCC2P18074 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ERCC2P18074 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 AP002414.1-201ENST00000391405 1147 ntBASIC17.64■□□□□ 0.41
ERCC2P18074 ELK2BP-201ENST00000415014 1224 ntBASIC17.64■□□□□ 0.41
ERCC2P18074 KRT18P27-201ENST00000427733 1299 ntBASIC17.64■□□□□ 0.41
ERCC2P18074 TPM4P1-201ENST00000436100 807 ntBASIC17.64■□□□□ 0.41
ERCC2P18074 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC2P18074 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.64■□□□□ 0.41
ERCC2P18074 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.64■□□□□ 0.41
ERCC2P18074 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC2P18074 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.64■□□□□ 0.41
ERCC2P18074 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 AC243591.1-201ENST00000452967 1364 ntBASIC17.64■□□□□ 0.41
ERCC2P18074 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC2P18074 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC2P18074 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC2P18074 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC2P18074 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
ERCC2P18074 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ERCC2P18074 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.63■□□□□ 0.41
ERCC2P18074 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.63■□□□□ 0.41
ERCC2P18074 PRORSD1P-202ENST00000563365 2154 ntBASIC17.63■□□□□ 0.41
ERCC2P18074 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC2P18074 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.63■□□□□ 0.41
ERCC2P18074 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms