Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 AP002414.1-201ENST00000391405 1147 ntBASIC18.85■□□□□ 0.61
ATF7P17544 AC211486.1-202ENST00000416371 468 ntBASIC18.85■□□□□ 0.61
ATF7P17544 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.85■□□□□ 0.61
ATF7P17544 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.85■□□□□ 0.61
ATF7P17544 ALG1L5P-201ENST00000482043 771 ntBASIC18.85■□□□□ 0.61
ATF7P17544 AC211476.1-201ENST00000503899 468 ntBASIC18.85■□□□□ 0.61
ATF7P17544 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.85■□□□□ 0.61
ATF7P17544 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.85■□□□□ 0.61
ATF7P17544 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.85■□□□□ 0.61
ATF7P17544 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.85■□□□□ 0.61
ATF7P17544 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.85■□□□□ 0.61
ATF7P17544 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.85■□□□□ 0.61
ATF7P17544 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ATF7P17544 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ATF7P17544 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.85■□□□□ 0.61
ATF7P17544 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.85■□□□□ 0.61
ATF7P17544 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ATF7P17544 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ATF7P17544 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.85■□□□□ 0.61
ATF7P17544 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATF7P17544 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATF7P17544 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF7P17544 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF7P17544 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATF7P17544 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF7P17544 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF7P17544 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ATF7P17544 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
ATF7P17544 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF7P17544 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.84■□□□□ 0.61
ATF7P17544 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.84■□□□□ 0.61
ATF7P17544 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF7P17544 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ATF7P17544 AC010654.1-201ENST00000615722 808 ntBASIC18.84■□□□□ 0.61
ATF7P17544 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
ATF7P17544 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.84■□□□□ 0.61
ATF7P17544 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATF7P17544 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF7P17544 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ATF7P17544 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF7P17544 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF7P17544 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF7P17544 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.84■□□□□ 0.61
ATF7P17544 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.84■□□□□ 0.61
ATF7P17544 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF7P17544 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF7P17544 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATF7P17544 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATF7P17544 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
ATF7P17544 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.83■□□□□ 0.61
ATF7P17544 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATF7P17544 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.83■□□□□ 0.61
ATF7P17544 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATF7P17544 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATF7P17544 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.83■□□□□ 0.61
ATF7P17544 KRT18P28-201ENST00000453838 1332 ntBASIC18.83■□□□□ 0.61
ATF7P17544 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF7P17544 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.83■□□□□ 0.6
ATF7P17544 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.83■□□□□ 0.6
ATF7P17544 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.83■□□□□ 0.6
ATF7P17544 YBX1P5-201ENST00000509441 847 ntBASIC18.83■□□□□ 0.6
ATF7P17544 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.83■□□□□ 0.6
ATF7P17544 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.83■□□□□ 0.6
ATF7P17544 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATF7P17544 AC010507.1-201ENST00000633895 436 ntBASIC18.83■□□□□ 0.6
ATF7P17544 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF7P17544 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.83■□□□□ 0.6
ATF7P17544 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.83■□□□□ 0.6
ATF7P17544 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF7P17544 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF7P17544 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.83■□□□□ 0.6
ATF7P17544 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF7P17544 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ATF7P17544 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF7P17544 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF7P17544 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.82■□□□□ 0.6
ATF7P17544 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF7P17544 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF7P17544 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.82■□□□□ 0.6
ATF7P17544 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF7P17544 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF7P17544 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF7P17544 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms