Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RARAP10276 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.04■□□□□ 0.48
RARAP10276 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.04■□□□□ 0.48
RARAP10276 AC148477.5-201ENST00000625164 1645 ntBASIC18.04■□□□□ 0.48
RARAP10276 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
RARAP10276 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.04■□□□□ 0.48
RARAP10276 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RARAP10276 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.04■□□□□ 0.48
RARAP10276 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.04■□□□□ 0.48
RARAP10276 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.04■□□□□ 0.48
RARAP10276 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RARAP10276 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARAP10276 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.03■□□□□ 0.48
RARAP10276 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARAP10276 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARAP10276 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARAP10276 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARAP10276 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARAP10276 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 ABCD1P5-201ENST00000445663 754 ntBASIC18.03■□□□□ 0.48
RARAP10276 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RARAP10276 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.03■□□□□ 0.48
RARAP10276 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.03■□□□□ 0.48
RARAP10276 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARAP10276 AL591684.3-201ENST00000605187 298 ntBASIC18.03■□□□□ 0.48
RARAP10276 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.03■□□□□ 0.48
RARAP10276 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.03■□□□□ 0.48
RARAP10276 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.03■□□□□ 0.48
RARAP10276 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.03■□□□□ 0.48
RARAP10276 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RARAP10276 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARAP10276 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.03■□□□□ 0.48
RARAP10276 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARAP10276 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RARAP10276 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.03■□□□□ 0.48
RARAP10276 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RARAP10276 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 AC092171.3-201ENST00000610122 2651 ntBASIC18.02■□□□□ 0.48
RARAP10276 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.02■□□□□ 0.48
RARAP10276 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.02■□□□□ 0.48
RARAP10276 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
RARAP10276 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.02■□□□□ 0.48
RARAP10276 KRT16P4-201ENST00000453883 522 ntBASIC18.02■□□□□ 0.48
RARAP10276 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RARAP10276 FOSL1P1-201ENST00000511041 816 ntBASIC18.02■□□□□ 0.48
RARAP10276 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RARAP10276 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARAP10276 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RARAP10276 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.02■□□□□ 0.48
RARAP10276 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RARAP10276 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RARAP10276 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RARAP10276 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RARAP10276 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RARAP10276 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RARAP10276 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
RARAP10276 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RARAP10276 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.01■□□□□ 0.47
RARAP10276 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.01■□□□□ 0.47
RARAP10276 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.01■□□□□ 0.47
RARAP10276 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.01■□□□□ 0.47
RARAP10276 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARAP10276 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.01■□□□□ 0.47
RARAP10276 SPDYE21P-201ENST00000413323 827 ntBASIC18.01■□□□□ 0.47
RARAP10276 AL020989.1-201ENST00000422979 469 ntBASIC18.01■□□□□ 0.47
RARAP10276 HCG4P8-203ENST00000443049 980 ntBASIC18.01■□□□□ 0.47
RARAP10276 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.01■□□□□ 0.47
RARAP10276 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms