Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.31■□□□□ 0.52
FAM228BP0C875 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
FAM228BP0C875 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FAM228BP0C875 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FAM228BP0C875 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
FAM228BP0C875 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.3■□□□□ 0.52
FAM228BP0C875 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FAM228BP0C875 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FAM228BP0C875 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FAM228BP0C875 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FAM228BP0C875 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FAM228BP0C875 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
FAM228BP0C875 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FAM228BP0C875 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FAM228BP0C875 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.3■□□□□ 0.52
FAM228BP0C875 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.3■□□□□ 0.52
FAM228BP0C875 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.3■□□□□ 0.52
FAM228BP0C875 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.3■□□□□ 0.52
FAM228BP0C875 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FAM228BP0C875 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.3■□□□□ 0.52
FAM228BP0C875 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.3■□□□□ 0.52
FAM228BP0C875 AP000867.4-201ENST00000641616 219 ntBASIC18.3■□□□□ 0.52
FAM228BP0C875 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FAM228BP0C875 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FAM228BP0C875 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FAM228BP0C875 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.3■□□□□ 0.52
FAM228BP0C875 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.3■□□□□ 0.52
FAM228BP0C875 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.3■□□□□ 0.52
FAM228BP0C875 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.3■□□□□ 0.52
FAM228BP0C875 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
FAM228BP0C875 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FAM228BP0C875 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
FAM228BP0C875 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.29■□□□□ 0.52
FAM228BP0C875 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
FAM228BP0C875 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.29■□□□□ 0.52
FAM228BP0C875 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.29■□□□□ 0.52
FAM228BP0C875 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.29■□□□□ 0.52
FAM228BP0C875 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
FAM228BP0C875 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.29■□□□□ 0.52
FAM228BP0C875 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.29■□□□□ 0.52
FAM228BP0C875 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.29■□□□□ 0.52
FAM228BP0C875 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.29■□□□□ 0.52
FAM228BP0C875 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
FAM228BP0C875 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
FAM228BP0C875 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.29■□□□□ 0.52
FAM228BP0C875 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.29■□□□□ 0.52
FAM228BP0C875 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FAM228BP0C875 HLA-A-202ENST00000376806 1854 ntBASIC18.29■□□□□ 0.52
FAM228BP0C875 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
FAM228BP0C875 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FAM228BP0C875 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FAM228BP0C875 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FAM228BP0C875 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FAM228BP0C875 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.28■□□□□ 0.52
FAM228BP0C875 AC004817.3-201ENST00000602957 2129 ntBASIC18.28■□□□□ 0.52
FAM228BP0C875 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
FAM228BP0C875 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
FAM228BP0C875 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FAM228BP0C875 LINC00265-3P-201ENST00000447588 903 ntBASIC18.28■□□□□ 0.52
FAM228BP0C875 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FAM228BP0C875 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.28■□□□□ 0.52
FAM228BP0C875 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.28■□□□□ 0.52
FAM228BP0C875 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.28■□□□□ 0.52
FAM228BP0C875 DUX4L17-201ENST00000557360 1267 ntBASIC18.28■□□□□ 0.52
FAM228BP0C875 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
FAM228BP0C875 MIR3180-1-201ENST00000580374 94 ntBASIC18.28■□□□□ 0.52
FAM228BP0C875 MIR3180-3-201ENST00000584616 94 ntBASIC18.28■□□□□ 0.52
FAM228BP0C875 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FAM228BP0C875 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms