Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.24■□□□□ 0.35
MMP2P08253 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP2P08253 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.24■□□□□ 0.35
MMP2P08253 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.24■□□□□ 0.35
MMP2P08253 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
MMP2P08253 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP2P08253 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
MMP2P08253 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.24■□□□□ 0.35
MMP2P08253 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP2P08253 AC002310.6-201ENST00000624451 1377 ntBASIC17.24■□□□□ 0.35
MMP2P08253 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP2P08253 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP2P08253 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
MMP2P08253 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
MMP2P08253 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP2P08253 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MMP2P08253 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
MMP2P08253 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
MMP2P08253 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 BCL2-203ENST00000589955 5011 ntBASIC17.23■□□□□ 0.35
MMP2P08253 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.23■□□□□ 0.35
MMP2P08253 AC098831.1-202ENST00000438821 336 ntBASIC17.23■□□□□ 0.35
MMP2P08253 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP2P08253 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
MMP2P08253 MIR1199-201ENST00000621445 119 ntBASIC17.23■□□□□ 0.35
MMP2P08253 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP2P08253 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.23■□□□□ 0.35
MMP2P08253 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP2P08253 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP2P08253 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP2P08253 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP2P08253 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 RNF216P1-203ENST00000404404 2427 ntBASIC17.22■□□□□ 0.35
MMP2P08253 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.22■□□□□ 0.35
MMP2P08253 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP2P08253 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.22■□□□□ 0.35
MMP2P08253 IGHV3-22-201ENST00000520721 359 ntBASIC17.22■□□□□ 0.35
MMP2P08253 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP2P08253 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.22■□□□□ 0.35
MMP2P08253 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.22■□□□□ 0.35
MMP2P08253 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.22■□□□□ 0.35
MMP2P08253 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 REXO1L3P-201ENST00000622202 1288 ntBASIC17.22■□□□□ 0.35
MMP2P08253 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
MMP2P08253 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MMP2P08253 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.22■□□□□ 0.35
MMP2P08253 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP2P08253 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP2P08253 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 AGGF1P2-201ENST00000426656 2106 ntBASIC17.21■□□□□ 0.35
MMP2P08253 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 NKILA-202ENST00000614771 2598 ntBASIC17.21■□□□□ 0.35
MMP2P08253 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MMP2P08253 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP2P08253 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
MMP2P08253 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MMP2P08253 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
MMP2P08253 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP2P08253 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP2P08253 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms