Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 KRT18P65-201ENST00000439811 1286 ntBASIC19.59■□□□□ 0.73
TPM2P07951 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TPM2P07951 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 AC024563.2-201ENST00000603282 481 ntBASIC19.59■□□□□ 0.73
TPM2P07951 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM2P07951 AC144831.1-201ENST00000573312 2656 ntBASIC19.59■□□□□ 0.73
TPM2P07951 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM2P07951 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM2P07951 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
TPM2P07951 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM2P07951 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM2P07951 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TPM2P07951 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM2P07951 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TPM2P07951 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.58■□□□□ 0.73
TPM2P07951 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM2P07951 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TPM2P07951 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.58■□□□□ 0.73
TPM2P07951 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.58■□□□□ 0.73
TPM2P07951 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TPM2P07951 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TPM2P07951 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM2P07951 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM2P07951 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.58■□□□□ 0.73
TPM2P07951 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TPM2P07951 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.58■□□□□ 0.72
TPM2P07951 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM2P07951 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.58■□□□□ 0.72
TPM2P07951 DDX43P3-201ENST00000441064 443 ntBASIC19.58■□□□□ 0.72
TPM2P07951 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
TPM2P07951 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.58■□□□□ 0.72
TPM2P07951 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
TPM2P07951 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.58■□□□□ 0.72
TPM2P07951 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TPM2P07951 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM2P07951 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.58■□□□□ 0.72
TPM2P07951 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM2P07951 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM2P07951 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.58■□□□□ 0.72
TPM2P07951 LINC00304-203ENST00000565008 1864 ntBASIC19.58■□□□□ 0.72
TPM2P07951 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM2P07951 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM2P07951 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM2P07951 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TPM2P07951 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM2P07951 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.58■□□□□ 0.72
TPM2P07951 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM2P07951 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.58■□□□□ 0.72
TPM2P07951 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TPM2P07951 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TPM2P07951 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.57■□□□□ 0.72
TPM2P07951 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.57■□□□□ 0.72
TPM2P07951 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 KRT89P-201ENST00000620027 1478 ntBASIC19.57■□□□□ 0.72
TPM2P07951 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TPM2P07951 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM2P07951 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.57■□□□□ 0.72
TPM2P07951 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM2P07951 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.57■□□□□ 0.72
TPM2P07951 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
TPM2P07951 AC141257.4-201ENST00000634557 245 ntBASIC19.57■□□□□ 0.72
TPM2P07951 AC136944.6-201ENST00000634818 245 ntBASIC19.57■□□□□ 0.72
TPM2P07951 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM2P07951 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM2P07951 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.57■□□□□ 0.72
TPM2P07951 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.57■□□□□ 0.72
TPM2P07951 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TPM2P07951 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TPM2P07951 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM2P07951 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM2P07951 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM2P07951 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM2P07951 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.56■□□□□ 0.72
TPM2P07951 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM2P07951 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms