Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL391807.1-203ENST00000604392 2365 ntBASIC14.45□□□□□ -0.1
CD74P04233 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CD74P04233 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.45□□□□□ -0.1
CD74P04233 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.45□□□□□ -0.1
CD74P04233 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.45□□□□□ -0.1
CD74P04233 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.45□□□□□ -0.1
CD74P04233 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.45□□□□□ -0.1
CD74P04233 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.45□□□□□ -0.1
CD74P04233 AC034232.1-201ENST00000506026 1064 ntBASIC14.45□□□□□ -0.1
CD74P04233 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.45□□□□□ -0.1
CD74P04233 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.45□□□□□ -0.1
CD74P04233 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.45□□□□□ -0.1
CD74P04233 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.45□□□□□ -0.1
CD74P04233 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CD74P04233 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.45□□□□□ -0.1
CD74P04233 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.45□□□□□ -0.1
CD74P04233 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.45□□□□□ -0.1
CD74P04233 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CD74P04233 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.45□□□□□ -0.1
CD74P04233 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
CD74P04233 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CD74P04233 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.44□□□□□ -0.1
CD74P04233 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CD74P04233 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 AC092384.3-202ENST00000564646 2873 ntBASIC14.44□□□□□ -0.1
CD74P04233 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CD74P04233 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CD74P04233 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CD74P04233 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CD74P04233 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.44□□□□□ -0.1
CD74P04233 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.44□□□□□ -0.1
CD74P04233 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.44□□□□□ -0.1
CD74P04233 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CD74P04233 AL136379.1-201ENST00000623471 2642 ntBASIC14.44□□□□□ -0.1
CD74P04233 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.44□□□□□ -0.1
CD74P04233 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.44□□□□□ -0.1
CD74P04233 MIR4651-201ENST00000582622 73 ntBASIC14.44□□□□□ -0.1
CD74P04233 AL136038.4-201ENST00000603606 1261 ntBASIC14.44□□□□□ -0.1
CD74P04233 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.44□□□□□ -0.1
CD74P04233 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.44□□□□□ -0.1
CD74P04233 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.44□□□□□ -0.1
CD74P04233 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.44□□□□□ -0.1
CD74P04233 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CD74P04233 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.44□□□□□ -0.1
CD74P04233 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.44□□□□□ -0.1
CD74P04233 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.44□□□□□ -0.1
CD74P04233 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD74P04233 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.43□□□□□ -0.1
CD74P04233 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.43□□□□□ -0.1
CD74P04233 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CD74P04233 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms