Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ZBED1O96006 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ZBED1O96006 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.15■□□□□ 0.5
ZBED1O96006 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
ZBED1O96006 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ZBED1O96006 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.15■□□□□ 0.5
ZBED1O96006 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.15■□□□□ 0.5
ZBED1O96006 AC073621.1-201ENST00000392730 636 ntBASIC18.15■□□□□ 0.5
ZBED1O96006 AC092910.1-201ENST00000482027 1129 ntBASIC18.15■□□□□ 0.5
ZBED1O96006 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.15■□□□□ 0.5
ZBED1O96006 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.15■□□□□ 0.5
ZBED1O96006 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.15■□□□□ 0.5
ZBED1O96006 AC006504.4-201ENST00000592118 1568 ntBASIC18.15■□□□□ 0.5
ZBED1O96006 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZBED1O96006 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ZBED1O96006 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.15■□□□□ 0.5
ZBED1O96006 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZBED1O96006 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZBED1O96006 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.14■□□□□ 0.5
ZBED1O96006 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ZBED1O96006 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ZBED1O96006 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ZBED1O96006 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ZBED1O96006 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ZBED1O96006 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.14■□□□□ 0.49
ZBED1O96006 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.14■□□□□ 0.49
ZBED1O96006 ELK2BP-201ENST00000415014 1224 ntBASIC18.14■□□□□ 0.49
ZBED1O96006 AL590627.1-203ENST00000421194 1026 ntBASIC18.14■□□□□ 0.49
ZBED1O96006 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.14■□□□□ 0.49
ZBED1O96006 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.14■□□□□ 0.49
ZBED1O96006 AC136632.2-201ENST00000512891 861 ntBASIC18.14■□□□□ 0.49
ZBED1O96006 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.14■□□□□ 0.49
ZBED1O96006 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.14■□□□□ 0.49
ZBED1O96006 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.14■□□□□ 0.49
ZBED1O96006 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.14■□□□□ 0.49
ZBED1O96006 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 AL356488.2-201ENST00000602755 427 ntBASIC18.14■□□□□ 0.49
ZBED1O96006 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.14■□□□□ 0.49
ZBED1O96006 MIR1199-201ENST00000621445 119 ntBASIC18.14■□□□□ 0.49
ZBED1O96006 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
ZBED1O96006 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ZBED1O96006 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.14■□□□□ 0.49
ZBED1O96006 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.14■□□□□ 0.49
ZBED1O96006 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.14■□□□□ 0.49
ZBED1O96006 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ZBED1O96006 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.14■□□□□ 0.49
ZBED1O96006 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
ZBED1O96006 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
ZBED1O96006 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZBED1O96006 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ZBED1O96006 AC080080.1-201ENST00000625121 2420 ntBASIC18.13■□□□□ 0.49
ZBED1O96006 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.13■□□□□ 0.49
ZBED1O96006 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.13■□□□□ 0.49
ZBED1O96006 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.13■□□□□ 0.49
ZBED1O96006 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.13■□□□□ 0.49
ZBED1O96006 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.13■□□□□ 0.49
ZBED1O96006 BX640515.1-201ENST00000617215 977 ntBASIC18.13■□□□□ 0.49
ZBED1O96006 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.13■□□□□ 0.49
ZBED1O96006 IL9RP2-201ENST00000423948 1312 ntBASIC18.13■□□□□ 0.49
ZBED1O96006 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZBED1O96006 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.13■□□□□ 0.49
ZBED1O96006 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.13■□□□□ 0.49
ZBED1O96006 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.13■□□□□ 0.49
ZBED1O96006 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms