Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GGPS1O95749 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GGPS1O95749 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GGPS1O95749 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GGPS1O95749 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 ACTG1P14-201ENST00000446382 1122 ntBASIC19.21■□□□□ 0.67
GGPS1O95749 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GGPS1O95749 AC027796.2-201ENST00000575326 344 ntBASIC19.21■□□□□ 0.67
GGPS1O95749 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.21■□□□□ 0.67
GGPS1O95749 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.21■□□□□ 0.67
GGPS1O95749 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GGPS1O95749 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
GGPS1O95749 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GGPS1O95749 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
GGPS1O95749 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.2■□□□□ 0.66
GGPS1O95749 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.2■□□□□ 0.66
GGPS1O95749 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GGPS1O95749 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.2■□□□□ 0.66
GGPS1O95749 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
GGPS1O95749 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.2■□□□□ 0.66
GGPS1O95749 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.2■□□□□ 0.66
GGPS1O95749 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GGPS1O95749 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.2■□□□□ 0.66
GGPS1O95749 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.2■□□□□ 0.66
GGPS1O95749 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 AP002472.1-201ENST00000577490 586 ntBASIC19.2■□□□□ 0.66
GGPS1O95749 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.2■□□□□ 0.66
GGPS1O95749 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GGPS1O95749 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.2■□□□□ 0.66
GGPS1O95749 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
GGPS1O95749 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.2■□□□□ 0.66
GGPS1O95749 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.2■□□□□ 0.66
GGPS1O95749 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.2■□□□□ 0.66
GGPS1O95749 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GGPS1O95749 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GGPS1O95749 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GGPS1O95749 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.19■□□□□ 0.66
GGPS1O95749 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.19■□□□□ 0.66
GGPS1O95749 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.19■□□□□ 0.66
GGPS1O95749 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.19■□□□□ 0.66
GGPS1O95749 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.19■□□□□ 0.66
GGPS1O95749 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.19■□□□□ 0.66
GGPS1O95749 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.19■□□□□ 0.66
GGPS1O95749 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.19■□□□□ 0.66
GGPS1O95749 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GGPS1O95749 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
GGPS1O95749 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.19■□□□□ 0.66
GGPS1O95749 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GGPS1O95749 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.18■□□□□ 0.66
GGPS1O95749 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
GGPS1O95749 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
GGPS1O95749 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.18■□□□□ 0.66
GGPS1O95749 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.18■□□□□ 0.66
GGPS1O95749 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.18■□□□□ 0.66
GGPS1O95749 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GGPS1O95749 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms