Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VAPBO95292 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VAPBO95292 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.27■□□□□ 0.36
VAPBO95292 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VAPBO95292 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.27■□□□□ 0.36
VAPBO95292 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VAPBO95292 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VAPBO95292 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.27■□□□□ 0.36
VAPBO95292 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.27■□□□□ 0.36
VAPBO95292 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.27■□□□□ 0.36
VAPBO95292 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.27■□□□□ 0.36
VAPBO95292 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.27■□□□□ 0.36
VAPBO95292 KRT16P4-201ENST00000453883 522 ntBASIC17.27■□□□□ 0.36
VAPBO95292 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VAPBO95292 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VAPBO95292 AC124947.2-201ENST00000547118 1133 ntBASIC17.27■□□□□ 0.36
VAPBO95292 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.27■□□□□ 0.36
VAPBO95292 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.27■□□□□ 0.36
VAPBO95292 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.27■□□□□ 0.36
VAPBO95292 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VAPBO95292 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VAPBO95292 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VAPBO95292 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.27■□□□□ 0.35
VAPBO95292 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VAPBO95292 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
VAPBO95292 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VAPBO95292 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VAPBO95292 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VAPBO95292 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VAPBO95292 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VAPBO95292 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VAPBO95292 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VAPBO95292 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.27■□□□□ 0.35
VAPBO95292 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VAPBO95292 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.26■□□□□ 0.35
VAPBO95292 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VAPBO95292 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 GPR89P-201ENST00000407924 1495 ntBASIC17.26■□□□□ 0.35
VAPBO95292 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.26■□□□□ 0.35
VAPBO95292 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VAPBO95292 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.26■□□□□ 0.35
VAPBO95292 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.26■□□□□ 0.35
VAPBO95292 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VAPBO95292 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.26■□□□□ 0.35
VAPBO95292 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.26■□□□□ 0.35
VAPBO95292 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
VAPBO95292 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VAPBO95292 AC018695.7-201ENST00000624587 2492 ntBASIC17.26■□□□□ 0.35
VAPBO95292 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPBO95292 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.25■□□□□ 0.35
VAPBO95292 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VAPBO95292 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
VAPBO95292 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VAPBO95292 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.25■□□□□ 0.35
VAPBO95292 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 FOSL1P1-201ENST00000511041 816 ntBASIC17.25■□□□□ 0.35
VAPBO95292 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.25■□□□□ 0.35
VAPBO95292 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.25■□□□□ 0.35
VAPBO95292 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VAPBO95292 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.25■□□□□ 0.35
VAPBO95292 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.25■□□□□ 0.35
VAPBO95292 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VAPBO95292 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.25■□□□□ 0.35
VAPBO95292 CROCCP1-201ENST00000426910 5675 ntBASIC17.25■□□□□ 0.35
VAPBO95292 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 FLJ38576-201ENST00000623820 2459 ntBASIC17.25■□□□□ 0.35
VAPBO95292 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VAPBO95292 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPBO95292 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.24■□□□□ 0.35
VAPBO95292 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VAPBO95292 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms