Protein–RNA interactions for Protein: O94888

UBXN7, UBX domain-containing protein 7, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN7O94888 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.67■□□□□ 0.26
UBXN7O94888 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.67■□□□□ 0.26
UBXN7O94888 AC139530.3-201ENST00000620344 690 ntBASIC16.67■□□□□ 0.26
UBXN7O94888 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.67■□□□□ 0.26
UBXN7O94888 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UBXN7O94888 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.67■□□□□ 0.26
UBXN7O94888 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN7O94888 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
UBXN7O94888 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.66■□□□□ 0.26
UBXN7O94888 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.66■□□□□ 0.26
UBXN7O94888 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.66■□□□□ 0.26
UBXN7O94888 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.66■□□□□ 0.26
UBXN7O94888 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.66■□□□□ 0.26
UBXN7O94888 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.66■□□□□ 0.26
UBXN7O94888 AC023274.1-201ENST00000418278 595 ntBASIC16.66■□□□□ 0.26
UBXN7O94888 KRT18P2-201ENST00000447938 1258 ntBASIC16.66■□□□□ 0.26
UBXN7O94888 HCG4B-203ENST00000450128 991 ntBASIC16.66■□□□□ 0.26
UBXN7O94888 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
UBXN7O94888 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.66■□□□□ 0.26
UBXN7O94888 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
UBXN7O94888 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
UBXN7O94888 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
UBXN7O94888 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.66■□□□□ 0.26
UBXN7O94888 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UBXN7O94888 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN7O94888 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.66■□□□□ 0.26
UBXN7O94888 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.65■□□□□ 0.26
UBXN7O94888 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
UBXN7O94888 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.65■□□□□ 0.26
UBXN7O94888 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.65■□□□□ 0.26
UBXN7O94888 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.65■□□□□ 0.26
UBXN7O94888 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
UBXN7O94888 DNAJB3-201ENST00000446806 729 ntBASIC16.65■□□□□ 0.26
UBXN7O94888 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.65■□□□□ 0.26
UBXN7O94888 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.65■□□□□ 0.26
UBXN7O94888 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.65■□□□□ 0.26
UBXN7O94888 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.65■□□□□ 0.26
UBXN7O94888 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.65■□□□□ 0.26
UBXN7O94888 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.65■□□□□ 0.26
UBXN7O94888 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.65■□□□□ 0.26
UBXN7O94888 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBXN7O94888 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBXN7O94888 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
UBXN7O94888 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN7O94888 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBXN7O94888 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBXN7O94888 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.64■□□□□ 0.25
UBXN7O94888 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBXN7O94888 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
UBXN7O94888 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBXN7O94888 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UBXN7O94888 YBX2P1-201ENST00000394192 760 ntBASIC16.64■□□□□ 0.25
UBXN7O94888 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.64■□□□□ 0.25
UBXN7O94888 AC004832.2-201ENST00000426397 482 ntBASIC16.64■□□□□ 0.25
UBXN7O94888 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.64■□□□□ 0.25
UBXN7O94888 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.64■□□□□ 0.25
UBXN7O94888 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBXN7O94888 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.64■□□□□ 0.25
UBXN7O94888 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.64■□□□□ 0.25
UBXN7O94888 MIR3687-2-201ENST00000577708 61 ntBASIC16.64■□□□□ 0.25
UBXN7O94888 MIR3687-1-201ENST00000614492 61 ntBASIC16.64■□□□□ 0.25
UBXN7O94888 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.64■□□□□ 0.25
UBXN7O94888 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBXN7O94888 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms