Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 AC060834.1-201ENST00000443027 2032 ntBASIC17.95■□□□□ 0.46
BEST1O76090 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 RHOQP3-201ENST00000437982 621 ntBASIC17.95■□□□□ 0.46
BEST1O76090 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 FAM185BP-201ENST00000443595 716 ntBASIC17.95■□□□□ 0.46
BEST1O76090 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST1O76090 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.95■□□□□ 0.46
BEST1O76090 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST1O76090 AC023511.2-201ENST00000618803 211 ntBASIC17.95■□□□□ 0.46
BEST1O76090 AC004877.2-201ENST00000623941 599 ntBASIC17.95■□□□□ 0.46
BEST1O76090 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BEST1O76090 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
BEST1O76090 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.95■□□□□ 0.46
BEST1O76090 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST1O76090 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST1O76090 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.95■□□□□ 0.46
BEST1O76090 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.95■□□□□ 0.46
BEST1O76090 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.95■□□□□ 0.46
BEST1O76090 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.94■□□□□ 0.46
BEST1O76090 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.94■□□□□ 0.46
BEST1O76090 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BEST1O76090 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.94■□□□□ 0.46
BEST1O76090 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST1O76090 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.94■□□□□ 0.46
BEST1O76090 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.94■□□□□ 0.46
BEST1O76090 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST1O76090 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.94■□□□□ 0.46
BEST1O76090 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.94■□□□□ 0.46
BEST1O76090 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
BEST1O76090 AC040169.1-201ENST00000565382 521 ntBASIC17.94■□□□□ 0.46
BEST1O76090 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.94■□□□□ 0.46
BEST1O76090 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.94■□□□□ 0.46
BEST1O76090 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST1O76090 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST1O76090 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST1O76090 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.93■□□□□ 0.46
BEST1O76090 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
BEST1O76090 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
BEST1O76090 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.93■□□□□ 0.46
BEST1O76090 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
BEST1O76090 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.93■□□□□ 0.46
BEST1O76090 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BEST1O76090 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.93■□□□□ 0.46
BEST1O76090 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.93■□□□□ 0.46
BEST1O76090 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.93■□□□□ 0.46
BEST1O76090 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.93■□□□□ 0.46
BEST1O76090 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.93■□□□□ 0.46
BEST1O76090 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.93■□□□□ 0.46
BEST1O76090 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BEST1O76090 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 AC129492.6-201ENST00000611383 1305 ntBASIC17.93■□□□□ 0.46
BEST1O76090 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BEST1O76090 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST1O76090 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.92■□□□□ 0.46
BEST1O76090 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST1O76090 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
BEST1O76090 AC025580.3-201ENST00000617932 1424 ntBASIC17.92■□□□□ 0.46
BEST1O76090 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.92■□□□□ 0.46
BEST1O76090 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BEST1O76090 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
BEST1O76090 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
BEST1O76090 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
BEST1O76090 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.92■□□□□ 0.46
BEST1O76090 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.92■□□□□ 0.46
BEST1O76090 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms