Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.97□□□□□ -0.01
UPK1BO75841 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.97□□□□□ -0.01
UPK1BO75841 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UPK1BO75841 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
UPK1BO75841 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 KRT18P23-201ENST00000435622 1283 ntBASIC14.97□□□□□ -0.01
UPK1BO75841 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.97□□□□□ -0.01
UPK1BO75841 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.97□□□□□ -0.01
UPK1BO75841 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 AC008687.6-201ENST00000596318 630 ntBASIC14.97□□□□□ -0.01
UPK1BO75841 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.97□□□□□ -0.01
UPK1BO75841 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.97□□□□□ -0.01
UPK1BO75841 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.97□□□□□ -0.01
UPK1BO75841 HLA-B-256ENST00000639848 1089 ntBASIC14.97□□□□□ -0.01
UPK1BO75841 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
UPK1BO75841 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
UPK1BO75841 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UPK1BO75841 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
UPK1BO75841 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
UPK1BO75841 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
UPK1BO75841 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
UPK1BO75841 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.96□□□□□ -0.01
UPK1BO75841 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.96□□□□□ -0.01
UPK1BO75841 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
UPK1BO75841 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.96□□□□□ -0.01
UPK1BO75841 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.96□□□□□ -0.01
UPK1BO75841 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.96□□□□□ -0.01
UPK1BO75841 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.96□□□□□ -0.01
UPK1BO75841 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.96□□□□□ -0.01
UPK1BO75841 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
UPK1BO75841 AP002490.2-201ENST00000524791 560 ntBASIC14.96□□□□□ -0.01
UPK1BO75841 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.96□□□□□ -0.01
UPK1BO75841 PNMA6B-201ENST00000538162 1200 ntBASIC14.96□□□□□ -0.01
UPK1BO75841 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
UPK1BO75841 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.96□□□□□ -0.01
UPK1BO75841 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.96□□□□□ -0.01
UPK1BO75841 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
UPK1BO75841 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
UPK1BO75841 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UPK1BO75841 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
UPK1BO75841 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
UPK1BO75841 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.96□□□□□ -0.02
UPK1BO75841 AC008406.3-201ENST00000620001 1374 ntBASIC14.96□□□□□ -0.02
UPK1BO75841 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
UPK1BO75841 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UPK1BO75841 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
UPK1BO75841 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.96□□□□□ -0.02
UPK1BO75841 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UPK1BO75841 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
UPK1BO75841 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.95□□□□□ -0.02
UPK1BO75841 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
UPK1BO75841 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UPK1BO75841 AL645728.1-201ENST00000366221 2101 ntBASIC14.95□□□□□ -0.02
UPK1BO75841 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.95□□□□□ -0.02
UPK1BO75841 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
UPK1BO75841 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UPK1BO75841 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
UPK1BO75841 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UPK1BO75841 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.95□□□□□ -0.02
UPK1BO75841 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
UPK1BO75841 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.95□□□□□ -0.02
UPK1BO75841 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms