Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PMPCBO75439 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PMPCBO75439 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PMPCBO75439 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.45■□□□□ 0.38
PMPCBO75439 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PMPCBO75439 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PMPCBO75439 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMPCBO75439 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PMPCBO75439 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMPCBO75439 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMPCBO75439 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PMPCBO75439 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMPCBO75439 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.45■□□□□ 0.38
PMPCBO75439 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMPCBO75439 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PMPCBO75439 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMPCBO75439 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMPCBO75439 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.45■□□□□ 0.38
PMPCBO75439 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.45■□□□□ 0.38
PMPCBO75439 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PMPCBO75439 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.44■□□□□ 0.38
PMPCBO75439 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PMPCBO75439 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.44■□□□□ 0.38
PMPCBO75439 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PMPCBO75439 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
PMPCBO75439 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
PMPCBO75439 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PMPCBO75439 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 SCARNA2-201ENST00000458748 420 ntBASIC17.44■□□□□ 0.38
PMPCBO75439 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PMPCBO75439 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.44■□□□□ 0.38
PMPCBO75439 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.44■□□□□ 0.38
PMPCBO75439 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.44■□□□□ 0.38
PMPCBO75439 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.44■□□□□ 0.38
PMPCBO75439 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 MTDHP4-201ENST00000600287 670 ntBASIC17.44■□□□□ 0.38
PMPCBO75439 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.44■□□□□ 0.38
PMPCBO75439 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.44■□□□□ 0.38
PMPCBO75439 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PMPCBO75439 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PMPCBO75439 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PMPCBO75439 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PMPCBO75439 AC092068.3-201ENST00000587894 2016 ntBASIC17.43■□□□□ 0.38
PMPCBO75439 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PMPCBO75439 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
PMPCBO75439 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
PMPCBO75439 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.43■□□□□ 0.38
PMPCBO75439 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.43■□□□□ 0.38
PMPCBO75439 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.43■□□□□ 0.38
PMPCBO75439 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.43■□□□□ 0.38
PMPCBO75439 PRORSD1P-202ENST00000563365 2154 ntBASIC17.43■□□□□ 0.38
PMPCBO75439 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 GPR89P-201ENST00000407924 1495 ntBASIC17.43■□□□□ 0.38
PMPCBO75439 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PMPCBO75439 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PMPCBO75439 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.42■□□□□ 0.38
PMPCBO75439 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PMPCBO75439 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMPCBO75439 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PMPCBO75439 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PMPCBO75439 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMPCBO75439 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMPCBO75439 NCF1C-201ENST00000438382 1427 ntBASIC17.42■□□□□ 0.38
PMPCBO75439 AC009053.2-201ENST00000563701 2365 ntBASIC17.42■□□□□ 0.38
PMPCBO75439 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.42■□□□□ 0.38
PMPCBO75439 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMPCBO75439 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms