Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
OPHN1O60890 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
OPHN1O60890 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.95■□□□□ 0.46
OPHN1O60890 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.95■□□□□ 0.46
OPHN1O60890 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.95■□□□□ 0.46
OPHN1O60890 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
OPHN1O60890 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 MYCLP1-201ENST00000372451 1075 ntBASIC17.95■□□□□ 0.46
OPHN1O60890 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.95■□□□□ 0.46
OPHN1O60890 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.95■□□□□ 0.46
OPHN1O60890 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
OPHN1O60890 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.95■□□□□ 0.46
OPHN1O60890 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.95■□□□□ 0.46
OPHN1O60890 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.95■□□□□ 0.46
OPHN1O60890 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.95■□□□□ 0.46
OPHN1O60890 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.95■□□□□ 0.46
OPHN1O60890 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
OPHN1O60890 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.95■□□□□ 0.46
OPHN1O60890 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.95■□□□□ 0.46
OPHN1O60890 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.95■□□□□ 0.46
OPHN1O60890 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.95■□□□□ 0.46
OPHN1O60890 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
OPHN1O60890 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
OPHN1O60890 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.95■□□□□ 0.46
OPHN1O60890 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
OPHN1O60890 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
OPHN1O60890 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
OPHN1O60890 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.94■□□□□ 0.46
OPHN1O60890 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.94■□□□□ 0.46
OPHN1O60890 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.94■□□□□ 0.46
OPHN1O60890 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.94■□□□□ 0.46
OPHN1O60890 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
OPHN1O60890 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
OPHN1O60890 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 AC122714.2-201ENST00000502787 707 ntBASIC17.94■□□□□ 0.46
OPHN1O60890 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.94■□□□□ 0.46
OPHN1O60890 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.94■□□□□ 0.46
OPHN1O60890 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.94■□□□□ 0.46
OPHN1O60890 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.94■□□□□ 0.46
OPHN1O60890 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.94■□□□□ 0.46
OPHN1O60890 AC005336.2-201ENST00000593183 939 ntBASIC17.94■□□□□ 0.46
OPHN1O60890 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
OPHN1O60890 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
OPHN1O60890 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.94■□□□□ 0.46
OPHN1O60890 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.94■□□□□ 0.46
OPHN1O60890 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.94■□□□□ 0.46
OPHN1O60890 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.94■□□□□ 0.46
OPHN1O60890 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.94■□□□□ 0.46
OPHN1O60890 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
OPHN1O60890 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.94■□□□□ 0.46
OPHN1O60890 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
OPHN1O60890 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
OPHN1O60890 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.93■□□□□ 0.46
OPHN1O60890 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.93■□□□□ 0.46
OPHN1O60890 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
OPHN1O60890 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.93■□□□□ 0.46
OPHN1O60890 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
OPHN1O60890 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
OPHN1O60890 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.93■□□□□ 0.46
OPHN1O60890 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
OPHN1O60890 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
OPHN1O60890 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms