Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 AC092068.3-201ENST00000587894 2016 ntBASIC17.37■□□□□ 0.37
PRAMEF11O60813 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 AC010654.1-201ENST00000615722 808 ntBASIC17.36■□□□□ 0.37
PRAMEF11O60813 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 OR6D1P-202ENST00000641007 5290 ntBASIC17.36■□□□□ 0.37
PRAMEF11O60813 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF11O60813 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF11O60813 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 AC106730.1-201ENST00000566722 1090 ntBASIC17.35■□□□□ 0.37
PRAMEF11O60813 MIR4751-201ENST00000578027 74 ntBASIC17.35■□□□□ 0.37
PRAMEF11O60813 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 REXO1L3P-201ENST00000622202 1288 ntBASIC17.35■□□□□ 0.37
PRAMEF11O60813 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF11O60813 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF11O60813 AC012313.1-201ENST00000593393 3059 ntBASIC17.34■□□□□ 0.37
PRAMEF11O60813 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms