Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 MED15P5-201ENST00000423150 992 ntBASIC16.13■□□□□ 0.17
PRAMEF2O60811 ACTG1P4-201ENST00000425123 1122 ntBASIC16.13■□□□□ 0.17
PRAMEF2O60811 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 PRYP5-201ENST00000451909 266 ntBASIC16.13■□□□□ 0.17
PRAMEF2O60811 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 AC034105.1-201ENST00000563488 319 ntBASIC16.13■□□□□ 0.17
PRAMEF2O60811 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 FAM197Y3-203ENST00000618346 717 ntBASIC16.13■□□□□ 0.17
PRAMEF2O60811 MIR1199-201ENST00000621445 119 ntBASIC16.13■□□□□ 0.17
PRAMEF2O60811 AP002414.3-201ENST00000589352 1468 ntBASIC16.13■□□□□ 0.17
PRAMEF2O60811 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 AL645608.8-201ENST00000606034 2086 ntBASIC16.13■□□□□ 0.17
PRAMEF2O60811 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF2O60811 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEF2O60811 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 AC093525.9-201ENST00000624961 1746 ntBASIC16.12■□□□□ 0.17
PRAMEF2O60811 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 AC006557.2-201ENST00000592985 1240 ntBASIC16.12■□□□□ 0.17
PRAMEF2O60811 AC140113.2-201ENST00000604370 208 ntBASIC16.12■□□□□ 0.17
PRAMEF2O60811 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEF2O60811 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF2O60811 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 AC097637.2-201ENST00000624096 1997 ntBASIC16.11■□□□□ 0.17
PRAMEF2O60811 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.11■□□□□ 0.17
PRAMEF2O60811 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms