Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 KRT18P65-201ENST00000439811 1286 ntBASIC17.09■□□□□ 0.33
KLHL41O60662 LINC00265-3P-201ENST00000447588 903 ntBASIC17.09■□□□□ 0.33
KLHL41O60662 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 AC113404.2-201ENST00000507884 177 ntBASIC17.09■□□□□ 0.33
KLHL41O60662 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.09■□□□□ 0.33
KLHL41O60662 AP000867.3-201ENST00000524675 377 ntBASIC17.09■□□□□ 0.33
KLHL41O60662 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.09■□□□□ 0.33
KLHL41O60662 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.09■□□□□ 0.33
KLHL41O60662 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.09■□□□□ 0.33
KLHL41O60662 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.09■□□□□ 0.33
KLHL41O60662 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.09■□□□□ 0.33
KLHL41O60662 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 KRT89P-201ENST00000620027 1478 ntBASIC17.09■□□□□ 0.33
KLHL41O60662 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KLHL41O60662 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KLHL41O60662 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 AC046185.3-201ENST00000623228 1824 ntBASIC17.09■□□□□ 0.33
KLHL41O60662 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.09■□□□□ 0.33
KLHL41O60662 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.09■□□□□ 0.33
KLHL41O60662 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.09■□□□□ 0.33
KLHL41O60662 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.09■□□□□ 0.33
KLHL41O60662 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KLHL41O60662 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.08■□□□□ 0.33
KLHL41O60662 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
KLHL41O60662 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
KLHL41O60662 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KLHL41O60662 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KLHL41O60662 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KLHL41O60662 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KLHL41O60662 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
KLHL41O60662 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KLHL41O60662 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.08■□□□□ 0.33
KLHL41O60662 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
KLHL41O60662 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KLHL41O60662 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KLHL41O60662 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
KLHL41O60662 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.08■□□□□ 0.33
KLHL41O60662 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
KLHL41O60662 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
KLHL41O60662 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.08■□□□□ 0.32
KLHL41O60662 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KLHL41O60662 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KLHL41O60662 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
KLHL41O60662 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
KLHL41O60662 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.08■□□□□ 0.32
KLHL41O60662 TPSP2-201ENST00000561760 610 ntBASIC17.08■□□□□ 0.32
KLHL41O60662 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.08■□□□□ 0.32
KLHL41O60662 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.08■□□□□ 0.32
KLHL41O60662 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.08■□□□□ 0.32
KLHL41O60662 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KLHL41O60662 GPR32P1-201ENST00000601788 811 ntBASIC17.08■□□□□ 0.32
KLHL41O60662 AC024563.2-201ENST00000603282 481 ntBASIC17.08■□□□□ 0.32
KLHL41O60662 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
KLHL41O60662 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
KLHL41O60662 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KLHL41O60662 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KLHL41O60662 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KLHL41O60662 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KLHL41O60662 AL603756.1-201ENST00000606511 2163 ntBASIC17.08■□□□□ 0.32
KLHL41O60662 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.07■□□□□ 0.32
KLHL41O60662 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 LINC02199-201ENST00000506655 2702 ntBASIC17.07■□□□□ 0.32
KLHL41O60662 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.07■□□□□ 0.32
KLHL41O60662 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 TSPY19P-201ENST00000418461 509 ntBASIC17.07■□□□□ 0.32
KLHL41O60662 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
KLHL41O60662 TSPY18P-201ENST00000441642 509 ntBASIC17.07■□□□□ 0.32
KLHL41O60662 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.07■□□□□ 0.32
KLHL41O60662 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.07■□□□□ 0.32
KLHL41O60662 AC005332.3-201ENST00000589904 676 ntBASIC17.07■□□□□ 0.32
KLHL41O60662 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.07■□□□□ 0.32
KLHL41O60662 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
KLHL41O60662 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
KLHL41O60662 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.07■□□□□ 0.32
KLHL41O60662 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.07■□□□□ 0.32
KLHL41O60662 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
KLHL41O60662 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms