Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.49■□□□□ 0.23
GFRA3O60609 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.49■□□□□ 0.23
GFRA3O60609 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
GFRA3O60609 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.49■□□□□ 0.23
GFRA3O60609 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GFRA3O60609 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.49■□□□□ 0.23
GFRA3O60609 AL031055.1-201ENST00000606362 631 ntBASIC16.49■□□□□ 0.23
GFRA3O60609 WFDC1-204ENST00000613603 549 ntBASIC16.49■□□□□ 0.23
GFRA3O60609 AFG3L1P-217ENST00000557444 2447 ntBASIC16.49■□□□□ 0.23
GFRA3O60609 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.49■□□□□ 0.23
GFRA3O60609 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.49■□□□□ 0.23
GFRA3O60609 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.48■□□□□ 0.23
GFRA3O60609 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.48■□□□□ 0.23
GFRA3O60609 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
GFRA3O60609 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 CSF2RBP1-201ENST00000447905 391 ntBASIC16.48■□□□□ 0.23
GFRA3O60609 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.48■□□□□ 0.23
GFRA3O60609 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.48■□□□□ 0.23
GFRA3O60609 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.48■□□□□ 0.23
GFRA3O60609 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.48■□□□□ 0.23
GFRA3O60609 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.48■□□□□ 0.23
GFRA3O60609 RN7SL602P-201ENST00000578326 324 ntBASIC16.48■□□□□ 0.23
GFRA3O60609 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
GFRA3O60609 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.48■□□□□ 0.23
GFRA3O60609 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.48■□□□□ 0.23
GFRA3O60609 AL033527.5-201ENST00000641382 801 ntBASIC16.48■□□□□ 0.23
GFRA3O60609 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GFRA3O60609 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.48■□□□□ 0.23
GFRA3O60609 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GFRA3O60609 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.48■□□□□ 0.23
GFRA3O60609 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GFRA3O60609 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.48■□□□□ 0.23
GFRA3O60609 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GFRA3O60609 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFRA3O60609 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.47■□□□□ 0.23
GFRA3O60609 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.47■□□□□ 0.23
GFRA3O60609 HLA-H-201ENST00000383620 1096 ntBASIC16.47■□□□□ 0.23
GFRA3O60609 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 BTBD6P1-201ENST00000412176 1267 ntBASIC16.47■□□□□ 0.23
GFRA3O60609 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.47■□□□□ 0.23
GFRA3O60609 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.47■□□□□ 0.23
GFRA3O60609 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.47■□□□□ 0.23
GFRA3O60609 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.47■□□□□ 0.23
GFRA3O60609 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.47■□□□□ 0.23
GFRA3O60609 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.47■□□□□ 0.23
GFRA3O60609 AC093726.1-201ENST00000608064 963 ntBASIC16.47■□□□□ 0.23
GFRA3O60609 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.47■□□□□ 0.23
GFRA3O60609 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.47■□□□□ 0.23
GFRA3O60609 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.47■□□□□ 0.23
GFRA3O60609 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
GFRA3O60609 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.47■□□□□ 0.23
GFRA3O60609 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFRA3O60609 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.46■□□□□ 0.23
GFRA3O60609 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.46■□□□□ 0.23
GFRA3O60609 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.46■□□□□ 0.23
GFRA3O60609 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GFRA3O60609 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms