Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MSI1O43347 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
MSI1O43347 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.79■□□□□ 0.44
MSI1O43347 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
MSI1O43347 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.79■□□□□ 0.44
MSI1O43347 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.79■□□□□ 0.44
MSI1O43347 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.79■□□□□ 0.44
MSI1O43347 AC092053.1-201ENST00000605787 1936 ntBASIC17.79■□□□□ 0.44
MSI1O43347 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MSI1O43347 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MSI1O43347 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.79■□□□□ 0.44
MSI1O43347 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.79■□□□□ 0.44
MSI1O43347 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 CRYGEP-201ENST00000412192 528 ntBASIC17.79■□□□□ 0.44
MSI1O43347 IGLL3P-201ENST00000412472 434 ntBASIC17.79■□□□□ 0.44
MSI1O43347 KRT18P2-201ENST00000447938 1258 ntBASIC17.79■□□□□ 0.44
MSI1O43347 AC010654.1-201ENST00000615722 808 ntBASIC17.79■□□□□ 0.44
MSI1O43347 FAM197Y3-203ENST00000618346 717 ntBASIC17.79■□□□□ 0.44
MSI1O43347 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MSI1O43347 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MSI1O43347 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.79■□□□□ 0.44
MSI1O43347 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
MSI1O43347 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
MSI1O43347 AC012313.1-201ENST00000593393 3059 ntBASIC17.79■□□□□ 0.44
MSI1O43347 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSI1O43347 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MSI1O43347 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.78■□□□□ 0.44
MSI1O43347 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MSI1O43347 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MSI1O43347 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
MSI1O43347 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.78■□□□□ 0.44
MSI1O43347 PRSS29P-201ENST00000440800 595 ntBASIC17.78■□□□□ 0.44
MSI1O43347 HCG4B-203ENST00000450128 991 ntBASIC17.78■□□□□ 0.44
MSI1O43347 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.78■□□□□ 0.44
MSI1O43347 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.78■□□□□ 0.44
MSI1O43347 AC018845.2-201ENST00000568326 409 ntBASIC17.78■□□□□ 0.44
MSI1O43347 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.78■□□□□ 0.44
MSI1O43347 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.78■□□□□ 0.44
MSI1O43347 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MSI1O43347 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.78■□□□□ 0.44
MSI1O43347 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.78■□□□□ 0.44
MSI1O43347 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSI1O43347 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.77■□□□□ 0.44
MSI1O43347 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MSI1O43347 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.77■□□□□ 0.44
MSI1O43347 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
MSI1O43347 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MSI1O43347 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
MSI1O43347 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MSI1O43347 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MSI1O43347 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MSI1O43347 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.77■□□□□ 0.44
MSI1O43347 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.77■□□□□ 0.44
MSI1O43347 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MSI1O43347 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.77■□□□□ 0.44
MSI1O43347 AL591424.1-201ENST00000442569 1213 ntBASIC17.77■□□□□ 0.44
MSI1O43347 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.77■□□□□ 0.44
MSI1O43347 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.77■□□□□ 0.44
MSI1O43347 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MSI1O43347 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.77■□□□□ 0.44
MSI1O43347 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MSI1O43347 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
MSI1O43347 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MSI1O43347 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MSI1O43347 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms