Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PAX4O43316 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.31□□□□□ -0.44
PAX4O43316 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PAX4O43316 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.31□□□□□ -0.44
PAX4O43316 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
PAX4O43316 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.31□□□□□ -0.44
PAX4O43316 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC12.31□□□□□ -0.44
PAX4O43316 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.31□□□□□ -0.44
PAX4O43316 KRT18P56-201ENST00000507275 550 ntBASIC12.31□□□□□ -0.44
PAX4O43316 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.31□□□□□ -0.44
PAX4O43316 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.31□□□□□ -0.44
PAX4O43316 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.31□□□□□ -0.44
PAX4O43316 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.31□□□□□ -0.44
PAX4O43316 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.31□□□□□ -0.44
PAX4O43316 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.31□□□□□ -0.44
PAX4O43316 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
PAX4O43316 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
PAX4O43316 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.31□□□□□ -0.44
PAX4O43316 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.31□□□□□ -0.44
PAX4O43316 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.31□□□□□ -0.44
PAX4O43316 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PAX4O43316 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PAX4O43316 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.3□□□□□ -0.44
PAX4O43316 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 KRT8P10-201ENST00000450021 1447 ntBASIC12.3□□□□□ -0.44
PAX4O43316 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PAX4O43316 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 KLF4P1-201ENST00000412782 1185 ntBASIC12.3□□□□□ -0.44
PAX4O43316 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PAX4O43316 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.3□□□□□ -0.44
PAX4O43316 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC12.3□□□□□ -0.44
PAX4O43316 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.3□□□□□ -0.44
PAX4O43316 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 STK19B-204ENST00000512515 211 ntBASIC12.3□□□□□ -0.44
PAX4O43316 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.3□□□□□ -0.44
PAX4O43316 AC091304.2-201ENST00000564639 760 ntBASIC12.3□□□□□ -0.44
PAX4O43316 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.3□□□□□ -0.44
PAX4O43316 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.3□□□□□ -0.44
PAX4O43316 AC019129.2-201ENST00000609837 1235 ntBASIC12.3□□□□□ -0.44
PAX4O43316 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PAX4O43316 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
PAX4O43316 AC011270.2-201ENST00000624293 2550 ntBASIC12.3□□□□□ -0.44
PAX4O43316 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.3□□□□□ -0.44
PAX4O43316 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.3□□□□□ -0.44
PAX4O43316 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
PAX4O43316 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms