Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.34■□□□□ 0.53
CEP290O15078 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.34■□□□□ 0.53
CEP290O15078 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.34■□□□□ 0.53
CEP290O15078 MIR8072-201ENST00000614241 80 ntBASIC18.34■□□□□ 0.53
CEP290O15078 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEP290O15078 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEP290O15078 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.34■□□□□ 0.53
CEP290O15078 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CEP290O15078 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEP290O15078 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEP290O15078 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEP290O15078 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEP290O15078 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.34■□□□□ 0.53
CEP290O15078 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEP290O15078 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.34■□□□□ 0.53
CEP290O15078 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CEP290O15078 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.34■□□□□ 0.53
CEP290O15078 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.33■□□□□ 0.53
CEP290O15078 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CEP290O15078 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CEP290O15078 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.33■□□□□ 0.53
CEP290O15078 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CEP290O15078 AC005229.1-201ENST00000392885 409 ntBASIC18.33■□□□□ 0.53
CEP290O15078 CSF2RBP1-201ENST00000447905 391 ntBASIC18.33■□□□□ 0.53
CEP290O15078 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.33■□□□□ 0.53
CEP290O15078 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.33■□□□□ 0.53
CEP290O15078 BTNL10-201ENST00000595971 695 ntBASIC18.33■□□□□ 0.53
CEP290O15078 WFDC1-204ENST00000613603 549 ntBASIC18.33■□□□□ 0.53
CEP290O15078 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.33■□□□□ 0.53
CEP290O15078 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.33■□□□□ 0.53
CEP290O15078 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CEP290O15078 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
CEP290O15078 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.33■□□□□ 0.53
CEP290O15078 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CEP290O15078 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.33■□□□□ 0.53
CEP290O15078 CLDN5-201ENST00000403084 2357 ntBASIC18.33■□□□□ 0.53
CEP290O15078 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CEP290O15078 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CEP290O15078 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CEP290O15078 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CEP290O15078 REXO1L11P-201ENST00000620964 1927 ntBASIC18.33■□□□□ 0.52
CEP290O15078 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CEP290O15078 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.33■□□□□ 0.52
CEP290O15078 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CEP290O15078 AC002558.1-201ENST00000488906 803 ntBASIC18.33■□□□□ 0.52
CEP290O15078 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.33■□□□□ 0.52
CEP290O15078 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.33■□□□□ 0.52
CEP290O15078 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.33■□□□□ 0.52
CEP290O15078 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.33■□□□□ 0.52
CEP290O15078 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CEP290O15078 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.33■□□□□ 0.52
CEP290O15078 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CEP290O15078 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.32■□□□□ 0.52
CEP290O15078 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.32■□□□□ 0.52
CEP290O15078 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CEP290O15078 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.32■□□□□ 0.52
CEP290O15078 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 AL079307.3-201ENST00000556114 283 ntBASIC18.32■□□□□ 0.52
CEP290O15078 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.32■□□□□ 0.52
CEP290O15078 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.32■□□□□ 0.52
CEP290O15078 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CEP290O15078 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
CEP290O15078 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 SPDYE18-201ENST00000510091 1050 ntBASIC18.32■□□□□ 0.52
CEP290O15078 MIR3615-201ENST00000581999 87 ntBASIC18.32■□□□□ 0.52
CEP290O15078 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CEP290O15078 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.32■□□□□ 0.52
CEP290O15078 AC093525.8-201ENST00000624099 1342 ntBASIC18.32■□□□□ 0.52
CEP290O15078 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CEP290O15078 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.31■□□□□ 0.52
CEP290O15078 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEP290O15078 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.31■□□□□ 0.52
CEP290O15078 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.31■□□□□ 0.52
CEP290O15078 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CEP290O15078 RN7SL618P-201ENST00000477850 296 ntBASIC18.31■□□□□ 0.52
CEP290O15078 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.31■□□□□ 0.52
CEP290O15078 AL031055.1-201ENST00000606362 631 ntBASIC18.31■□□□□ 0.52
CEP290O15078 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEP290O15078 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CEP290O15078 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.31■□□□□ 0.52
CEP290O15078 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEP290O15078 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEP290O15078 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEP290O15078 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CEP290O15078 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CEP290O15078 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.31■□□□□ 0.52
CEP290O15078 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEP290O15078 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEP290O15078 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CEP290O15078 FOXO1B-201ENST00000504678 1527 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms