Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 REXO1L11P-201ENST00000620964 1927 ntBASIC16.43■□□□□ 0.22
PCDH17O14917 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH17O14917 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 SIGLEC30P-201ENST00000455569 941 ntBASIC16.43■□□□□ 0.22
PCDH17O14917 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH17O14917 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.43■□□□□ 0.22
PCDH17O14917 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PCDH17O14917 AC025062.2-201ENST00000605477 670 ntBASIC16.43■□□□□ 0.22
PCDH17O14917 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDH17O14917 AL589182.2-201ENST00000619332 1049 ntBASIC16.43■□□□□ 0.22
PCDH17O14917 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDH17O14917 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH17O14917 AL121761.2-201ENST00000598007 1648 ntBASIC16.43■□□□□ 0.22
PCDH17O14917 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
PCDH17O14917 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH17O14917 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH17O14917 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 AC009949.1-201ENST00000623048 1830 ntBASIC16.42■□□□□ 0.22
PCDH17O14917 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDH17O14917 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDH17O14917 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH17O14917 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH17O14917 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH17O14917 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PCDH17O14917 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH17O14917 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH17O14917 KLF4P1-201ENST00000412782 1185 ntBASIC16.42■□□□□ 0.22
PCDH17O14917 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH17O14917 AC005104.2-201ENST00000427818 678 ntBASIC16.42■□□□□ 0.22
PCDH17O14917 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH17O14917 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDH17O14917 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH17O14917 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.42■□□□□ 0.22
PCDH17O14917 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.42■□□□□ 0.22
PCDH17O14917 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDH17O14917 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PCDH17O14917 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDH17O14917 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH17O14917 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH17O14917 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH17O14917 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDH17O14917 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH17O14917 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH17O14917 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDH17O14917 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH17O14917 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH17O14917 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH17O14917 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH17O14917 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH17O14917 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PCDH17O14917 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH17O14917 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH17O14917 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH17O14917 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH17O14917 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH17O14917 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.41■□□□□ 0.22
PCDH17O14917 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PCDH17O14917 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH17O14917 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
PCDH17O14917 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH17O14917 MIR574-201ENST00000385209 96 ntBASIC16.41■□□□□ 0.22
PCDH17O14917 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDH17O14917 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDH17O14917 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH17O14917 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH17O14917 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH17O14917 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH17O14917 AC019129.2-201ENST00000609837 1235 ntBASIC16.41■□□□□ 0.22
PCDH17O14917 AC148477.8-201ENST00000624298 468 ntBASIC16.41■□□□□ 0.22
PCDH17O14917 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH17O14917 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH17O14917 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH17O14917 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDH17O14917 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH17O14917 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH17O14917 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDH17O14917 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDH17O14917 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PCDH17O14917 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH17O14917 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms