Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD2O14647 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC23.48■■□□□ 1.35
CHD2O14647 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.48■■□□□ 1.35
CHD2O14647 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.48■■□□□ 1.35
CHD2O14647 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CHD2O14647 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC23.48■■□□□ 1.35
CHD2O14647 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 SPDYE19P-201ENST00000338590 713 ntBASIC23.47■■□□□ 1.35
CHD2O14647 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
CHD2O14647 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC23.47■■□□□ 1.35
CHD2O14647 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
CHD2O14647 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC23.47■■□□□ 1.35
CHD2O14647 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC23.47■■□□□ 1.35
CHD2O14647 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 AL023806.1-201ENST00000603994 1649 ntBASIC23.47■■□□□ 1.35
CHD2O14647 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CHD2O14647 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
CHD2O14647 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC23.47■■□□□ 1.35
CHD2O14647 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC23.47■■□□□ 1.35
CHD2O14647 GLI4-203ENST00000517468 963 ntTSL 5 BASIC23.47■■□□□ 1.35
CHD2O14647 AC055876.2-201ENST00000531834 546 ntBASIC23.47■■□□□ 1.35
CHD2O14647 SPTSSB-204ENST00000617024 1292 ntBASIC23.47■■□□□ 1.35
CHD2O14647 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD2O14647 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CHD2O14647 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD2O14647 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHD2O14647 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD2O14647 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD2O14647 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD2O14647 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.46■■□□□ 1.35
CHD2O14647 FAM86MP-201ENST00000340703 885 ntBASIC23.46■■□□□ 1.35
CHD2O14647 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD2O14647 MIR4259-201ENST00000584466 101 ntBASIC23.46■■□□□ 1.35
CHD2O14647 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHD2O14647 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD2O14647 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHD2O14647 SLC9A3P2-201ENST00000447821 2021 ntBASIC23.46■■□□□ 1.35
CHD2O14647 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
CHD2O14647 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHD2O14647 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.46■■□□□ 1.35
CHD2O14647 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD2O14647 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD2O14647 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC23.45■■□□□ 1.35
CHD2O14647 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC23.45■■□□□ 1.35
CHD2O14647 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CHD2O14647 STX3-203ENST00000529177 1571 ntTSL 2 BASIC23.45■■□□□ 1.35
CHD2O14647 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
CHD2O14647 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD2O14647 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD2O14647 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC23.45■■□□□ 1.34
CHD2O14647 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHD2O14647 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC23.45■■□□□ 1.34
CHD2O14647 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CHD2O14647 MIR4525-201ENST00000580000 75 ntBASIC23.45■■□□□ 1.34
CHD2O14647 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC23.45■■□□□ 1.34
CHD2O14647 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
CHD2O14647 SNX12-206ENST00000622259 661 ntTSL 5 BASIC23.45■■□□□ 1.34
CHD2O14647 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC23.45■■□□□ 1.34
CHD2O14647 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHD2O14647 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.34
CHD2O14647 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CHD2O14647 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD2O14647 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.45■■□□□ 1.34
CHD2O14647 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC23.45■■□□□ 1.34
CHD2O14647 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CHD2O14647 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.45■■□□□ 1.34
CHD2O14647 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CHD2O14647 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC23.45■■□□□ 1.34
CHD2O14647 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHD2O14647 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD2O14647 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHD2O14647 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD2O14647 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHD2O14647 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC23.44■■□□□ 1.34
CHD2O14647 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD2O14647 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC23.44■■□□□ 1.34
CHD2O14647 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
CHD2O14647 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD2O14647 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC23.44■■□□□ 1.34
CHD2O14647 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
CHD2O14647 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD2O14647 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD2O14647 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD2O14647 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD2O14647 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC23.44■■□□□ 1.34
CHD2O14647 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
CHD2O14647 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
CHD2O14647 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC23.44■■□□□ 1.34
CHD2O14647 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms