Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC188H7C350 AC011558.1-201ENST00000623459 338 ntBASIC17.87■□□□□ 0.45
CCDC188H7C350 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC188H7C350 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC188H7C350 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC188H7C350 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC188H7C350 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC188H7C350 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC188H7C350 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC188H7C350 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC188H7C350 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.87■□□□□ 0.45
CCDC188H7C350 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC188H7C350 AC009336.1-201ENST00000608941 1553 ntBASIC17.87■□□□□ 0.45
CCDC188H7C350 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC188H7C350 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CCDC188H7C350 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC188H7C350 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC188H7C350 AC079328.2-201ENST00000561241 3354 ntBASIC17.86■□□□□ 0.45
CCDC188H7C350 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CCDC188H7C350 FAM220CP-201ENST00000395253 831 ntBASIC17.86■□□□□ 0.45
CCDC188H7C350 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.86■□□□□ 0.45
CCDC188H7C350 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC188H7C350 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC188H7C350 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC188H7C350 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC188H7C350 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC188H7C350 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CCDC188H7C350 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC188H7C350 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC188H7C350 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC188H7C350 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CCDC188H7C350 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC188H7C350 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CCDC188H7C350 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC188H7C350 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC188H7C350 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC188H7C350 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC188H7C350 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC188H7C350 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC188H7C350 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC188H7C350 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCDC188H7C350 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 STK19B-204ENST00000512515 211 ntBASIC17.85■□□□□ 0.45
CCDC188H7C350 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC188H7C350 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC188H7C350 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC188H7C350 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC188H7C350 AL138831.2-201ENST00000606564 490 ntBASIC17.85■□□□□ 0.45
CCDC188H7C350 Z83836.1-201ENST00000624605 1642 ntBASIC17.85■□□□□ 0.45
CCDC188H7C350 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC188H7C350 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC188H7C350 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC188H7C350 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC188H7C350 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC188H7C350 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
CCDC188H7C350 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC188H7C350 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC188H7C350 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms