Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 DNAJB3-201ENST00000446806 729 ntBASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 AC108073.2-201ENST00000464002 357 ntBASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 AC002347.1-201ENST00000569543 541 ntBASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 AC055717.3-201ENST00000622967 595 ntBASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA3F8WFD2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.64■□□□□ 0.1
NPIPA3F8WFD2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 RPSAP43-201ENST00000402237 625 ntBASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 GPX1P2-201ENST00000429271 606 ntBASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 AL138688.1-201ENST00000624851 1594 ntBASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA3F8WFD2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms