Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 AC105339.3-201ENST00000560043 636 ntBASIC16.31■□□□□ 0.2
LRIT2A6NDA9 AC012640.2-201ENST00000561606 901 ntBASIC16.31■□□□□ 0.2
LRIT2A6NDA9 TERC-201ENST00000602385 541 ntBASIC16.31■□□□□ 0.2
LRIT2A6NDA9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LRIT2A6NDA9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 AC243591.1-201ENST00000452967 1364 ntBASIC16.3■□□□□ 0.2
LRIT2A6NDA9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 AC136632.2-201ENST00000512891 861 ntBASIC16.3■□□□□ 0.2
LRIT2A6NDA9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 AL805961.1-202ENST00000641562 540 ntBASIC16.3■□□□□ 0.2
LRIT2A6NDA9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT2A6NDA9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 AL031284.1-201ENST00000419297 478 ntBASIC16.29■□□□□ 0.2
LRIT2A6NDA9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 PAWRP1-201ENST00000451083 565 ntBASIC16.29■□□□□ 0.2
LRIT2A6NDA9 AC009078.2-202ENST00000463353 338 ntBASIC16.29■□□□□ 0.2
LRIT2A6NDA9 RNA5SP419-201ENST00000515908 135 ntBASIC16.29■□□□□ 0.2
LRIT2A6NDA9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 AL662844.1-201ENST00000546340 181 ntBASIC16.29■□□□□ 0.2
LRIT2A6NDA9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms