Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 TEX28P1-201ENST00000613479 1221 ntBASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 TEX28P2-201ENST00000617764 1221 ntBASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
BIVM-ERCC5R4GMW8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC28.2■■■□□ 2.11
BIVM-ERCC5R4GMW8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
BIVM-ERCC5R4GMW8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
BIVM-ERCC5R4GMW8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
BIVM-ERCC5R4GMW8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
BIVM-ERCC5R4GMW8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
BIVM-ERCC5R4GMW8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
BIVM-ERCC5R4GMW8 SPTLC1P1-201ENST00000447199 261 ntBASIC28.2■■■□□ 2.1
BIVM-ERCC5R4GMW8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC28.2■■■□□ 2.1
BIVM-ERCC5R4GMW8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
BIVM-ERCC5R4GMW8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
BIVM-ERCC5R4GMW8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC28.2■■■□□ 2.1
BIVM-ERCC5R4GMW8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
BIVM-ERCC5R4GMW8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 AC124947.2-201ENST00000547118 1133 ntBASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 AC018529.1-201ENST00000613063 361 ntBASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 HLA-H-201ENST00000383620 1096 ntBASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 AC007274.1-201ENST00000439805 662 ntBASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC28.18■■■□□ 2.1
BIVM-ERCC5R4GMW8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 AP001350.2-201ENST00000625104 1094 ntBASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 AC108860.2-201ENST00000562760 2183 ntBASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
BIVM-ERCC5R4GMW8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
BIVM-ERCC5R4GMW8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
BIVM-ERCC5R4GMW8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
BIVM-ERCC5R4GMW8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
BIVM-ERCC5R4GMW8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC28.16■■■□□ 2.1
BIVM-ERCC5R4GMW8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
BIVM-ERCC5R4GMW8 AL021920.2-201ENST00000624828 1351 ntBASIC28.16■■■□□ 2.1
BIVM-ERCC5R4GMW8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC28.16■■■□□ 2.1
BIVM-ERCC5R4GMW8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
BIVM-ERCC5R4GMW8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
BIVM-ERCC5R4GMW8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
BIVM-ERCC5R4GMW8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC28.15■■■□□ 2.1
BIVM-ERCC5R4GMW8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
BIVM-ERCC5R4GMW8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
BIVM-ERCC5R4GMW8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms