Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX9Q9Y5X1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX9Q9Y5X1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX9Q9Y5X1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX9Q9Y5X1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX9Q9Y5X1 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.38■□□□□ 0.53
SNX9Q9Y5X1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX9Q9Y5X1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX9Q9Y5X1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 MRPL20P1-201ENST00000400819 433 ntBASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX9Q9Y5X1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 CRYGEP-201ENST00000412192 528 ntBASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 PAWRP1-201ENST00000451083 565 ntBASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 AC020916.1-201ENST00000587762 1774 ntBASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 FAM197Y3-203ENST00000618346 717 ntBASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX9Q9Y5X1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 PRSS29P-201ENST00000440800 595 ntBASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 VN2R19P-201ENST00000442399 1052 ntBASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 AL591424.1-201ENST00000442569 1213 ntBASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 AC064836.3-201ENST00000607928 673 ntBASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX9Q9Y5X1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX9Q9Y5X1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SNX9Q9Y5X1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX9Q9Y5X1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX9Q9Y5X1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms