Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAI2Q9Y5P3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.39■□□□□ 0.37
RAI2Q9Y5P3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.39■□□□□ 0.37
RAI2Q9Y5P3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 ELK2BP-201ENST00000415014 1224 ntBASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 RPS8P6-201ENST00000426177 609 ntBASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 AC105339.3-201ENST00000560043 636 ntBASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 MIR7706-201ENST00000613747 67 ntBASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.38■□□□□ 0.37
RAI2Q9Y5P3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 GPR89P-201ENST00000407924 1495 ntBASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 PGAM5P1-201ENST00000518923 814 ntBASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 AP002414.3-201ENST00000589352 1468 ntBASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI2Q9Y5P3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 LINC02012-201ENST00000608206 1725 ntBASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 LTB4R2-202ENST00000528054 3092 ntBASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 AC073621.1-201ENST00000392730 636 ntBASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 MIR3197-201ENST00000582241 73 ntBASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 AP001160.2-201ENST00000596071 487 ntBASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.36■□□□□ 0.37
RAI2Q9Y5P3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms