Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGA11Q9Y5H2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
PCDHGA11Q9Y5H2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 AL135999.2-201ENST00000622438 1686 ntBASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 KRT16P4-201ENST00000453883 522 ntBASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA11Q9Y5H2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 SLC25A1P3-201ENST00000395415 828 ntBASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 MIR5100-201ENST00000579544 119 ntBASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 AP000867.4-201ENST00000641616 219 ntBASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 PCDH8P1-201ENST00000428983 2773 ntBASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 AL596257.1-201ENST00000641463 2694 ntBASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA11Q9Y5H2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms