Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 AP002414.3-201ENST00000589352 1468 ntBASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 AL020989.1-201ENST00000422979 469 ntBASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 NKAPP1-205ENST00000585790 367 ntBASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 AL139288.1-201ENST00000623748 933 ntBASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 AL135999.2-201ENST00000622438 1686 ntBASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PCDHB1Q9Y5F3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 SLC25A1P3-201ENST00000395415 828 ntBASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 AC007967.2-201ENST00000432613 625 ntBASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 SIGLEC30P-201ENST00000455569 941 ntBASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 UNC93B6-202ENST00000528242 690 ntBASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 AC027796.2-201ENST00000575326 344 ntBASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 MIR3687-2-201ENST00000577708 61 ntBASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 MTDHP4-201ENST00000600287 670 ntBASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 MIR3687-1-201ENST00000614492 61 ntBASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 SIGLEC16-201ENST00000599858 1437 ntBASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB1Q9Y5F3 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms