Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Q9Y3F1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.84■□□□□ 0.61
Q9Y3F1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.84■□□□□ 0.61
Q9Y3F1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Q9Y3F1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Q9Y3F1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.83■□□□□ 0.61
Q9Y3F1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q9Y3F1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Q9Y3F1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.83■□□□□ 0.61
Q9Y3F1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Q9Y3F1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.83■□□□□ 0.61
Q9Y3F1 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.83■□□□□ 0.6
Q9Y3F1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.83■□□□□ 0.6
Q9Y3F1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.83■□□□□ 0.6
Q9Y3F1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.83■□□□□ 0.6
Q9Y3F1 AC097493.3-201ENST00000509725 367 ntBASIC18.83■□□□□ 0.6
Q9Y3F1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.83■□□□□ 0.6
Q9Y3F1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.83■□□□□ 0.6
Q9Y3F1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.83■□□□□ 0.6
Q9Y3F1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.83■□□□□ 0.6
Q9Y3F1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.83■□□□□ 0.6
Q9Y3F1 AF228730.6-201ENST00000641497 218 ntBASIC18.83■□□□□ 0.6
Q9Y3F1 AC084121.3-201ENST00000641716 218 ntBASIC18.83■□□□□ 0.6
Q9Y3F1 AC105233.6-201ENST00000642093 218 ntBASIC18.83■□□□□ 0.6
Q9Y3F1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.83■□□□□ 0.6
Q9Y3F1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9Y3F1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9Y3F1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9Y3F1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Q9Y3F1 AC093525.9-201ENST00000624961 1746 ntBASIC18.83■□□□□ 0.6
Q9Y3F1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 AC135050.7-201ENST00000624508 2218 ntBASIC18.82■□□□□ 0.6
Q9Y3F1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Q9Y3F1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.82■□□□□ 0.6
Q9Y3F1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.82■□□□□ 0.6
Q9Y3F1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 SLC25A1P3-201ENST00000395415 828 ntBASIC18.82■□□□□ 0.6
Q9Y3F1 AC015922.1-201ENST00000421102 1152 ntBASIC18.82■□□□□ 0.6
Q9Y3F1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.82■□□□□ 0.6
Q9Y3F1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.82■□□□□ 0.6
Q9Y3F1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.82■□□□□ 0.6
Q9Y3F1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.82■□□□□ 0.6
Q9Y3F1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.82■□□□□ 0.6
Q9Y3F1 AC021097.1-201ENST00000607902 574 ntBASIC18.82■□□□□ 0.6
Q9Y3F1 MIR6080-201ENST00000617359 66 ntBASIC18.82■□□□□ 0.6
Q9Y3F1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.82■□□□□ 0.6
Q9Y3F1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Q9Y3F1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 KRT8P49-201ENST00000604166 1432 ntBASIC18.82■□□□□ 0.6
Q9Y3F1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.82■□□□□ 0.6
Q9Y3F1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q9Y3F1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 AL021920.2-201ENST00000624828 1351 ntBASIC18.81■□□□□ 0.6
Q9Y3F1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.81■□□□□ 0.6
Q9Y3F1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Q9Y3F1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.81■□□□□ 0.6
Q9Y3F1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Q9Y3F1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.81■□□□□ 0.6
Q9Y3F1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.81■□□□□ 0.6
Q9Y3F1 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.81■□□□□ 0.6
Q9Y3F1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Q9Y3F1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.81■□□□□ 0.6
Q9Y3F1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
Q9Y3F1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.81■□□□□ 0.6
Q9Y3F1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.81■□□□□ 0.6
Q9Y3F1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.81■□□□□ 0.6
Q9Y3F1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Q9Y3F1 AC016027.1-202ENST00000607927 1699 ntBASIC18.81■□□□□ 0.6
Q9Y3F1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.81■□□□□ 0.6
Q9Y3F1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q9Y3F1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.8■□□□□ 0.6
Q9Y3F1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.8■□□□□ 0.6
Q9Y3F1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9Y3F1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9Y3F1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9Y3F1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9Y3F1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.8■□□□□ 0.6
Q9Y3F1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms