Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 DBET-201ENST00000630918 3363 ntBASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 CCR12P-201ENST00000446203 998 ntBASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 KRT18P6-201ENST00000555540 1265 ntBASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 FAM197Y4-202ENST00000622692 608 ntBASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RCL1Q9Y2P8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RCL1Q9Y2P8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RCL1Q9Y2P8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
RCL1Q9Y2P8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RCL1Q9Y2P8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RCL1Q9Y2P8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RCL1Q9Y2P8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.08□□□□□ -0.15
RCL1Q9Y2P8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RCL1Q9Y2P8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
RCL1Q9Y2P8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCL1Q9Y2P8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RCL1Q9Y2P8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCL1Q9Y2P8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCL1Q9Y2P8 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCL1Q9Y2P8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RCL1Q9Y2P8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCL1Q9Y2P8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCL1Q9Y2P8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms