Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 TSPY22P-201ENST00000427496 604 ntBASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 RNF126P1-202ENST00000569893 925 ntBASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HHLA3Q9XRX5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 AC105917.1-201ENST00000506637 2539 ntBASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 SPDYE13P-201ENST00000445314 798 ntBASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 AC112698.1-201ENST00000510299 916 ntBASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 AC090616.6-201ENST00000582640 721 ntBASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HHLA3Q9XRX5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 AC100803.2-201ENST00000562459 1963 ntBASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HHLA3Q9XRX5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms