Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 AC009053.2-201ENST00000563701 2365 ntBASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGC3Q9UN70 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGC3Q9UN70 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGC3Q9UN70 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGC3Q9UN70 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHGC3Q9UN70 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHGC3Q9UN70 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PCDHGC3Q9UN70 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHGC3Q9UN70 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGC3Q9UN70 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 AC136632.2-201ENST00000512891 861 ntBASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 AC106886.4-201ENST00000623557 2502 ntBASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGC3Q9UN70 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 AL021920.2-201ENST00000624828 1351 ntBASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 RPS2P28-201ENST00000314255 741 ntBASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 AC105339.3-201ENST00000560043 636 ntBASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 AC012640.2-201ENST00000561606 901 ntBASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 FAM215A-202ENST00000632077 792 ntBASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms