Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 DUSP5P1-201ENST00000441325 1139 ntBASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 AC008608.2-201ENST00000606089 416 ntBASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 AL355877.3-201ENST00000622820 899 ntBASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CHRNA9Q9UGM1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 AL356309.3-201ENST00000624132 1934 ntBASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA9Q9UGM1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 AKR1C7P-201ENST00000305623 895 ntBASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms