Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
DNMT3BQ9UBC3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
DNMT3BQ9UBC3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.84■□□□□ 0.45
DNMT3BQ9UBC3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3BQ9UBC3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.84■□□□□ 0.45
DNMT3BQ9UBC3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3BQ9UBC3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3BQ9UBC3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3BQ9UBC3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.83■□□□□ 0.45
DNMT3BQ9UBC3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
DNMT3BQ9UBC3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3BQ9UBC3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
DNMT3BQ9UBC3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3BQ9UBC3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3BQ9UBC3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.83■□□□□ 0.45
DNMT3BQ9UBC3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3BQ9UBC3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 AL096865.1-201ENST00000606796 927 ntBASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
DNMT3BQ9UBC3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 TFAMP1-201ENST00000412727 736 ntBASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 AC005237.2-201ENST00000434368 219 ntBASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 AC079140.1-201ENST00000508039 487 ntBASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 AC243562.1-201ENST00000560672 389 ntBASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 AC005498.2-205ENST00000593218 784 ntBASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3BQ9UBC3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 HMGA1P7-201ENST00000406908 502 ntBASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 AL592309.1-201ENST00000443127 649 ntBASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3BQ9UBC3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms