Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.69■□□□□ 0.26
NDE1Q9NXR1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.69■□□□□ 0.26
NDE1Q9NXR1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 AC116562.4-202ENST00000641738 218 ntBASIC16.69■□□□□ 0.26
NDE1Q9NXR1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDE1Q9NXR1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 AC104640.1-201ENST00000562617 2109 ntBASIC16.68■□□□□ 0.26
NDE1Q9NXR1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 AC009154.2-201ENST00000621177 724 ntBASIC16.68■□□□□ 0.26
NDE1Q9NXR1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDE1Q9NXR1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 MYCLP1-201ENST00000372451 1075 ntBASIC16.67■□□□□ 0.26
NDE1Q9NXR1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 AC128676.1-201ENST00000454392 318 ntBASIC16.67■□□□□ 0.26
NDE1Q9NXR1 AC024243.1-201ENST00000609234 778 ntBASIC16.67■□□□□ 0.26
NDE1Q9NXR1 REXO1L10P-201ENST00000615707 1290 ntBASIC16.67■□□□□ 0.26
NDE1Q9NXR1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 REXO1L12P-201ENST00000622156 912 ntBASIC16.67■□□□□ 0.26
NDE1Q9NXR1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDE1Q9NXR1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDE1Q9NXR1 DBET-201ENST00000630918 3363 ntBASIC16.66■□□□□ 0.26
NDE1Q9NXR1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDE1Q9NXR1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
NDE1Q9NXR1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDE1Q9NXR1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms