Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 FAAHP1-202ENST00000446499 1238 ntBASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 AC073648.2-201ENST00000510116 352 ntBASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 KRT126P-201ENST00000549467 1181 ntBASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 RN7SL510P-201ENST00000581311 263 ntBASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 AL121761.2-201ENST00000598007 1648 ntBASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 AL139424.1-201ENST00000607572 797 ntBASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN4Q9NRR5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 AC025062.2-201ENST00000605477 670 ntBASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
UBQLN4Q9NRR5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 AL590787.1-201ENST00000568856 1315 ntBASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 AC092053.1-201ENST00000605787 1936 ntBASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 AC080080.1-201ENST00000625121 2420 ntBASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN4Q9NRR5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms