Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 ZNF444P1-201ENST00000559497 298 ntBASIC19.22■□□□□ 0.67
CBX8Q9HC52 AC140113.3-201ENST00000605663 199 ntBASIC19.22■□□□□ 0.67
CBX8Q9HC52 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.22■□□□□ 0.67
CBX8Q9HC52 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CBX8Q9HC52 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 AL135999.2-201ENST00000622438 1686 ntBASIC19.21■□□□□ 0.67
CBX8Q9HC52 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 HYMAI-201ENST00000635591 3347 ntBASIC19.21■□□□□ 0.67
CBX8Q9HC52 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CBX8Q9HC52 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CBX8Q9HC52 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 FAM8A6P-201ENST00000407496 1135 ntBASIC19.2■□□□□ 0.66
CBX8Q9HC52 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX8Q9HC52 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CBX8Q9HC52 AL365203.3-201ENST00000609742 2057 ntBASIC19.2■□□□□ 0.66
CBX8Q9HC52 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms