Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 MTDHP3-201ENST00000594186 672 ntBASIC15.35■□□□□ 0.05
NELFAQ9H3P2 AC104692.2-201ENST00000603054 253 ntBASIC15.35■□□□□ 0.05
NELFAQ9H3P2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 AC073592.4-201ENST00000623827 446 ntBASIC15.35■□□□□ 0.05
NELFAQ9H3P2 TP73-AS1-207ENST00000624167 988 ntBASIC15.35■□□□□ 0.05
NELFAQ9H3P2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 AC009336.1-201ENST00000608941 1553 ntBASIC15.35■□□□□ 0.05
NELFAQ9H3P2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 AC148477.5-201ENST00000625164 1645 ntBASIC15.35■□□□□ 0.05
NELFAQ9H3P2 AC079776.2-201ENST00000641154 1609 ntBASIC15.35■□□□□ 0.05
NELFAQ9H3P2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 AP001094.4-201ENST00000579008 2176 ntBASIC15.35■□□□□ 0.05
NELFAQ9H3P2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.35■□□□□ 0.05
NELFAQ9H3P2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 SPDYE21P-201ENST00000413323 827 ntBASIC15.34■□□□□ 0.05
NELFAQ9H3P2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 FAAHP1-202ENST00000446499 1238 ntBASIC15.34■□□□□ 0.05
NELFAQ9H3P2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 AL121912.1-201ENST00000603683 238 ntBASIC15.34■□□□□ 0.05
NELFAQ9H3P2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.34■□□□□ 0.05
NELFAQ9H3P2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 SIGLEC16-201ENST00000599858 1437 ntBASIC15.34■□□□□ 0.05
NELFAQ9H3P2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFAQ9H3P2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NELFAQ9H3P2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
NELFAQ9H3P2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NELFAQ9H3P2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NELFAQ9H3P2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NELFAQ9H3P2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.33■□□□□ 0.05
NELFAQ9H3P2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
NELFAQ9H3P2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
NELFAQ9H3P2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NELFAQ9H3P2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NELFAQ9H3P2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 SART3-203ENST00000546611 1184 ntBASIC15.33■□□□□ 0.04
NELFAQ9H3P2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 AC009053.2-201ENST00000563701 2365 ntBASIC15.33■□□□□ 0.04
NELFAQ9H3P2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NELFAQ9H3P2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms