Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR2J3Q9H1A7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 PCDH8P1-201ENST00000428983 2773 ntBASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 DOC2GP-204ENST00000639052 2548 ntBASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 DUX4L26-201ENST00000489078 1255 ntBASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 EGFEM1P-202ENST00000431685 1563 ntBASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR2J3Q9H1A7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms