Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 AC046185.3-201ENST00000623228 1824 ntBASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 AC007326.2-201ENST00000624224 7579 ntBASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SSBP4Q9BWG4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 KRT18P29-201ENST00000397031 1267 ntBASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 REXO1L10P-201ENST00000615707 1290 ntBASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 AL359736.2-201ENST00000621992 437 ntBASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 REXO1L12P-201ENST00000622156 912 ntBASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SSBP4Q9BWG4 AC092338.2-201ENST00000568827 1415 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms