Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 MED29-202ENST00000594368 1471 ntTSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 PCDH8P1-201ENST00000428983 2773 ntBASIC10.3□□□□□ -0.76
LIMD2Q9BT23 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 COPE-203ENST00000351079 907 ntTSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 IGHGP-201ENST00000390555 1178 ntBASIC10.3□□□□□ -0.76
LIMD2Q9BT23 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 AC112907.2-201ENST00000448639 330 ntBASIC10.3□□□□□ -0.76
LIMD2Q9BT23 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 SNX5-210ENST00000481323 562 ntTSL 3 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 LINC01451-201ENST00000623792 534 ntBASIC10.3□□□□□ -0.76
LIMD2Q9BT23 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.3□□□□□ -0.76
LIMD2Q9BT23 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 LINC01311-201ENST00000565162 1445 ntBASIC10.3□□□□□ -0.76
LIMD2Q9BT23 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LIMD2Q9BT23 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LIMD2Q9BT23 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms