Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 MIR4469-201ENST00000583919 79 ntBASIC19.96■□□□□ 0.79
SLF1Q9BQI6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 AL078644.1-201ENST00000609881 752 ntBASIC19.96■□□□□ 0.79
SLF1Q9BQI6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SLF1Q9BQI6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.79
SLF1Q9BQI6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 HTR5BP-201ENST00000430851 1154 ntBASIC19.95■□□□□ 0.78
SLF1Q9BQI6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SLF1Q9BQI6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 SLC25A6P5-201ENST00000435663 894 ntBASIC19.94■□□□□ 0.78
SLF1Q9BQI6 MKNK2P1-201ENST00000437526 628 ntBASIC19.94■□□□□ 0.78
SLF1Q9BQI6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 CXCL1P1-201ENST00000502804 216 ntBASIC19.94■□□□□ 0.78
SLF1Q9BQI6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLF1Q9BQI6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 AC012317.2-201ENST00000623305 2251 ntBASIC19.93■□□□□ 0.78
SLF1Q9BQI6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 AC025580.3-201ENST00000617932 1424 ntBASIC19.93■□□□□ 0.78
SLF1Q9BQI6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.93■□□□□ 0.78
SLF1Q9BQI6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms