Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.75■□□□□ 0.91
EYA3Q99504 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
EYA3Q99504 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.75■□□□□ 0.91
EYA3Q99504 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.75■□□□□ 0.91
EYA3Q99504 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 AL353732.1-201ENST00000569618 1459 ntBASIC20.75■□□□□ 0.91
EYA3Q99504 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
EYA3Q99504 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EYA3Q99504 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.74■□□□□ 0.91
EYA3Q99504 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.74■□□□□ 0.91
EYA3Q99504 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.74■□□□□ 0.91
EYA3Q99504 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.74■□□□□ 0.91
EYA3Q99504 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.74■□□□□ 0.91
EYA3Q99504 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.74■□□□□ 0.91
EYA3Q99504 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.74■□□□□ 0.91
EYA3Q99504 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.74■□□□□ 0.91
EYA3Q99504 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.74■□□□□ 0.91
EYA3Q99504 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.74■□□□□ 0.91
EYA3Q99504 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.74■□□□□ 0.91
EYA3Q99504 AC140878.1-201ENST00000565277 250 ntBASIC20.74■□□□□ 0.91
EYA3Q99504 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.74■□□□□ 0.91
EYA3Q99504 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.74■□□□□ 0.91
EYA3Q99504 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
EYA3Q99504 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
EYA3Q99504 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.74■□□□□ 0.91
EYA3Q99504 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.74■□□□□ 0.91
EYA3Q99504 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.74■□□□□ 0.91
EYA3Q99504 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.74■□□□□ 0.91
EYA3Q99504 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.74■□□□□ 0.91
EYA3Q99504 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EYA3Q99504 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
EYA3Q99504 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
EYA3Q99504 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.73■□□□□ 0.91
EYA3Q99504 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.73■□□□□ 0.91
EYA3Q99504 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.73■□□□□ 0.91
EYA3Q99504 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.73■□□□□ 0.91
EYA3Q99504 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.73■□□□□ 0.91
EYA3Q99504 HCG4-201ENST00000418983 998 ntBASIC20.73■□□□□ 0.91
EYA3Q99504 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.73■□□□□ 0.91
EYA3Q99504 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.73■□□□□ 0.91
EYA3Q99504 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
EYA3Q99504 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.73■□□□□ 0.91
EYA3Q99504 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.73■□□□□ 0.91
EYA3Q99504 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
EYA3Q99504 AC026150.2-201ENST00000564693 1156 ntBASIC20.73■□□□□ 0.91
EYA3Q99504 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.73■□□□□ 0.91
EYA3Q99504 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
EYA3Q99504 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.73■□□□□ 0.91
EYA3Q99504 AC084121.4-201ENST00000641598 221 ntBASIC20.73■□□□□ 0.91
EYA3Q99504 AF228730.8-201ENST00000642140 221 ntBASIC20.73■□□□□ 0.91
EYA3Q99504 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.73■□□□□ 0.91
EYA3Q99504 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.73■□□□□ 0.91
EYA3Q99504 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.73■□□□□ 0.91
EYA3Q99504 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.73■□□□□ 0.91
EYA3Q99504 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EYA3Q99504 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
EYA3Q99504 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
EYA3Q99504 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
EYA3Q99504 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EYA3Q99504 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
EYA3Q99504 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EYA3Q99504 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
EYA3Q99504 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EYA3Q99504 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EYA3Q99504 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.72■□□□□ 0.91
EYA3Q99504 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EYA3Q99504 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EYA3Q99504 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EYA3Q99504 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms